Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0928 ATGGCTACTAAGTTTGGTCGAGTTCTTAGTATCAGAGACAGAGTTGAAGATACTCTCTCTGCTCATCGTAACCAACTCATTTCTCTCCTCTCTAGATATGTGGCACAGGGTAGAGGGATTTTGCAACCACATAGTTTGATTGATGAGCTCGAAAACATTCTAGGTGAGGATCAAGAAACAGTGGATCTTAAAACTGGCCCCTTTGCCGAAATCATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATTGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTGAATGTATATGAACTCAGCGTGGAGCAATTGAGCGTTTCTGAATATCTCAGCTTCAAAGAAGAACTCGTAGATGGAAAGATTAATGACCGTTTTTTGTTGGAGCTTGATTTTGAACCATTTAATGCATCATTTCCACGTCCAACCCGCTCATCATCCATTGGCAATGGTGTCCAATTTCTCAACCGCCACCTATCTTCAAATATGTTTCGTAATAAAGATTCATTGGAGCCCTTGCTCGATTTCCTGCGAGTTCACAAATATAAAGGCCAAGCACTGATGTTAAATGATCGTATAGAAAGCATTTCCAAGCTTCAGTCTACTTTGGGCAAGGCTGAGGACCATCTTTCTAAGCTTGCACCTGATACACTCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGCTTTGAGAGAGGTTGGGGTGATACTTCCGAACGAGTTTTAGAGATGATGCATCTGCTGTCCGATATTCTTCAGGCCCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTCAATGTTGTGATATTATCTCCTCATGGCTACTTTGGGCAAGCCAATGTACTTGGTTTGCCCGACACTGGTGGCCAGGTTGTCTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATCCAGAAACAAGGACTAAATTTCACACCTAGAATTCTAATTGTTACCAGATTAATACCCGATGCGAATGGGACAACATGCAACCAACGGCTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAAATCAGACAAAGGCATTCTACGTAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGGCATATGCTGAGGATGCTGCCAGTGAAATCATTGCTGAGTTACAAGGTTATCCTGATTTCATCATCGGAAACTACAGCGACGGGAATCTTGTTGCATCTTTATTGGCTTATAAGATGGGAGTTACTCAGTGCACAATCGCACATGCACTGGAAAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGAAAAATACCATTTTTCATGTCAGTTTACTGCTGACCTAATAGCAATGAATAATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAGTATGAGAGCCACAGTGCTTTTACTCTTCCTGGACTCTATAGGGTTGTTCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCGATATATTTTCCCTACTCGGAAAAGCAGAAAAGACTTACAGCTCTGCATGGTTCAATTGAAAAGCTATTGTATGATCCTGAGCAGACTGATGATTACATTGGTTCACTGAAGGACCGTTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAAAACATAACTGGTTTGGTAGAAAGCTATGCTAAGAATAGCAAATTGAGGGAACTGGTCAACCTTGTCGTAGTAGCTGGTTATATCGATGTAAAGAAGTCCAGGGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATAATCTCATGAAAGAGTATGATTTAAATGGTGATTTCCGGTGGATCGTTTCGCAAACAAATAGAGCTCGTAATGGTGAACTGTATCGCTACATAGCCGACACAAAAGGCGCTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCTATGACTTGTGGGCTTCCCACATTTGCTACTTGCCATGGTGGTCCTGCCGAGATCATTGAGAACGGTATATCAGGGTTCCATATTGATCCTTATCACCCTGACCAAGTTTCTGAGCTATTGGTTGGATTCTTCGAACGATGCAAGGAGGATCCAAGCCATTGGAATAAGATATCTGATGGAGGTCTTCAAAGAATTTACGAAAGGTACACCTGGAAGATCTACTCGGAAAGGCTTATGACTTTGGCTGGGGTTTATAGTTTCTGGAAATACGTATCGAAATTAGAGAGGCGTGAAACTCGACGATACCTTGAGATGTTCTATACCCTTAAGTTTCGCGATCTGGCAAATTCTGTTCCACTAGCAAATGATGATCCAAATTAA 2433 0.4188 MATKFGRVLSIRDRVEDTLSAHRNQLISLLSRYVAQGRGILQPHSLIDELENILGEDQETVDLKTGPFAEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLSFKEELVDGKINDRFLLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDSLEPLLDFLRVHKYKGQALMLNDRIESISKLQSTLGKAEDHLSKLAPDTLYSEFEYVLQGMGFERGWGDTSERVLEMMHLLSDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLNFTPRILIVTRLIPDANGTTCNQRLERVSGTDHTHILRVPFKSDKGILRKWISRFDVWPYLEAYAEDAASEIIAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHSAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEKLLYDPEQTDDYIGSLKDRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSRDREEIAEIEKMHNLMKEYDLNGDFRWIVSQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIENGISGFHIDPYHPDQVSELLVGFFERCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYTLKFRDLANSVPLANDDPN* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0928 810 Pfam Glycosyl transferases group 1 566 739 IPR001296 GO:0016757
Lan16g0928 810 PANTHER - 3 809 IPR012820 GO:0005985|GO:0016157
Lan16g0928 810 TIGRFAM sucr_synth: sucrose synthase 23 804 IPR012820 GO:0005985|GO:0016157
Lan16g0928 810 PANTHER SUCROSE SYNTHASE 3 809 - -
Lan16g0928 810 Gene3D - 9 146 - -
Lan16g0928 810 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 296 764 - -
Lan16g0928 810 Gene3D - 147 276 - -
Lan16g0928 810 Gene3D Glycogen Phosphorylase B; 528 755 - -
Lan16g0928 810 Pfam Sucrose synthase 7 554 IPR000368 GO:0005985|GO:0016157
Lan16g0928 810 Gene3D Glycogen Phosphorylase B; 281 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0928 Lan-Chr16 16291875 16298523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0928 4 808 Glycosyltransferase AT4G02280 83.106 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0928 K00695 - gmx:100793371 1483.39