Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0913 ATGGAGGTGATGTATCATTCTTCAACTTTCCTTCTTCCTTCTGAGAGGGATACCCTTAATAACACTTCTCCTTCTCCTTTTTCTCTTTCCTACGCTCTCATTATTCTCAATCAACGCCTCCCCAGTTTTGCTCCTCTGCTTTGGGACCACGCCCAGTTACGAGTTTGTGCTGATGGAGGTGCGAATAGGCTGTTTGATGAAATGCCTCTTTTATTCCCTCATCAAGATATTTCCTATGTTCGCTCAAGGTACAAGCCCAATTTAATCAAAGGTGATATGGATTCTATCAGAAAAGAAGTACTTGATTTCTATGTGGAGCAGGGGACTAAGATAATTGATGAGTCTCATGATCAAGATTCCACAGATTTACATAAATGTGTAAGACACATATGTGAAGTCATGCCAAAAAACGATAAATCACCACTATGCATTCTAGTAGCGGGCGCACTTGGTGGGAGATTTGACCACGAGATGGGAAATATCAATGTGCTGTGTCGATTCTCCAACACACGAATAATCCTTCTGTCTGAGGATTGCCTCATTCACCTTCTTCCAAAGAATCACTGTCATAAGATCCTTATTCAATCTTCTTCTGAGGGTCCACATTGTGGACTCATTCCCATCGGGACGCCATCTGGAAGTTCTACAACCACTGGACTGAAATGGAACCTCAAAAACACTGAGATGAGATTTGGAGGATTAGTCAGCACATCAAATATTGTTGAAGAAGATATAGTGACAGTACAGTCAGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCTGTAG 792 0.4129 MEVMYHSSTFLLPSERDTLNNTSPSPFSLSYALIILNQRLPSFAPLLWDHAQLRVCADGGANRLFDEMPLLFPHQDISYVRSRYKPNLIKGDMDSIRKEVLDFYVEQGTKIIDESHDQDSTDLHKCVRHICEVMPKNDKSPLCILVAGALGGRFDHEMGNINVLCRFSNTRIILLSEDCLIHLLPKNHCHKILIQSSSEGPHCGLIPIGTPSGSSTTTGLKWNLKNTEMRFGGLVSTSNIVEEDIVTVQSDSDLLWTISIKKL* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0913 263 PIRSF TPK1 1 263 IPR016966 GO:0004788|GO:0005524|GO:0009229
Lan16g0913 263 SMART TPK_B1_binding_a_2_a 190 254 IPR007373 GO:0009229|GO:0030975
Lan16g0913 263 Pfam Thiamin pyrophosphokinase, catalytic domain 46 172 IPR007371 GO:0004788|GO:0005524|GO:0009229
Lan16g0913 263 PANTHER THIAMIN PYROPHOSPHOKINASE 3 261 - -
Lan16g0913 263 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 30 180 IPR036759 GO:0004788|GO:0005524|GO:0009229
Lan16g0913 263 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 190 255 IPR007373 GO:0009229|GO:0030975
Lan16g0913 263 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 33 258 IPR006282 GO:0004788|GO:0006772
Lan16g0913 263 Gene3D - 172 262 - -
Lan16g0913 263 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 182 262 IPR036371 GO:0009229
Lan16g0913 263 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 261 - -
Lan16g0913 263 Gene3D Thiamin pyrophosphokinase, catalytic domain 30 171 IPR036759 GO:0004788|GO:0005524|GO:0009229
Lan16g0913 263 CDD TPK 32 258 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0913 Lan-Chr16 16111578 16115316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0913 K00949 - gmx:100786303 403.675