Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0904 ATGGCTACTCTTTCTGCTTTACCAAACCCTAATCCCAATCCTAACCCCAATTTCCACCCCGACCAATCCCAAACCCTGGACTTCGATTCCCTCATGCTTCCGCAACCCCAATCCCCGCCGCCGCAACCTTCGCCGGAATCTTCTTCGCCTCCGCCGCCGCCGCAGCTTCTCCAAGTTTGCTTCAACCAAGACCACGCGTGTTTCGCTGCTGCAACCGATAACGGCTTCCGAATCTTCAACTGCGACCCGTTCCGCGAGCTCTTCCGGCGGGAATTCGACGGCGGCGGAATCGGCCACGTGGAGATGCTGTTCCGGTGTAATATACTCGCTCTTGTTGGCGGTGGGTCTCAACCTCAGTACCCTCAAACCAAGGTTATGATCTGGGACGATCACCAGGGGCGGTGCATCGGCGAGCTTTCGTTCCGGACAGTGGTTCATGGCGTTCGGCTTCGGCGAGACCGGATTATAGTAATTGTGGAGCAGAAGATATTTGTGTACAATTTCGCTGACCTCAAATTGTTGCACCAGATTGAGACTGTAGCAAACCCTAAGGGGCTTTGCGCGGTTTCCCAGGGTTCGGATTCGCTTGTTCTCGTGTGCCCTGGTTTGCATAAGGGGCAGATTAGGGTTGAGCATTATGCGTTGAAGAAGACTAAGTTCATTTCGGCGCATGATTCAAGCATTGCTTGTTTCGCTCTCACACTTGATGGGCAGTTAGTTGCTACTGCCAGCACCAAGGGGACGCTGATTCGGATATTCAATGCGGATAATGGCACACTACTTCAGGAAGTAAGAAGAGGTGCAAATGTAGCAGAGATCTTTAGTTTGGCATTCTCTGCTACTGCTCAGTGGTTAGCAGTCTCAAGCGACAAGGGTACTGTCCATGTTTTCGGCCTTAAGGTTAATTCCAGTATTCCTGAGAATGAAAAGCCACAGAGTTCATCCAATTCAGATGCTGCCATTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCAAAGGCGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCTCAGTTTCGCTTACAAGAGGGTTCTCATTACTCAGTTGCATTTGGCCTCCAAAAGAACACAATTATAATCCTTGGCATGGATGGAAGCTTTTATAAATGTCAATTCGATCCAGAGCACCGCGGGGAGATGACTCAGCTGGAATATCACAACTTTTTAAAGCCAGAATCTGCCATTTGA 1221 0.4955 MATLSALPNPNPNPNPNFHPDQSQTLDFDSLMLPQPQSPPPQPSPESSSPPPPPQLLQVCFNQDHACFAAATDNGFRIFNCDPFRELFRREFDGGGIGHVEMLFRCNILALVGGGSQPQYPQTKVMIWDDHQGRCIGELSFRTVVHGVRLRRDRIIVIVEQKIFVYNFADLKLLHQIETVANPKGLCAVSQGSDSLVLVCPGLHKGQIRVEHYALKKTKFISAHDSSIACFALTLDGQLVATASTKGTLIRIFNADNGTLLQEVRRGANVAEIFSLAFSATAQWLAVSSDKGTVHVFGLKVNSSIPENEKPQSSSNSDAAINPSNSPLSFIKFKGVLPKYFNSEWSVAQFRLQEGSHYSVAFGLQKNTIIILGMDGSFYKCQFDPEHRGEMTQLEYHNFLKPESAI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0904 406 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 19 405 - -
Lan16g0904 406 Pfam WD domain, G-beta repeat 271 297 IPR001680 GO:0005515
Lan16g0904 406 MobiDBLite consensus disorder prediction 34 55 - -
Lan16g0904 406 SUPERFAMILY WD40 repeat-like 51 306 IPR036322 GO:0005515
Lan16g0904 406 Gene3D - 55 380 IPR015943 GO:0005515
Lan16g0904 406 SMART WD40_4 214 254 IPR001680 GO:0005515
Lan16g0904 406 SMART WD40_4 257 298 IPR001680 GO:0005515
Lan16g0904 406 SMART WD40_4 42 80 IPR001680 GO:0005515
Lan16g0904 406 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 19 405 - -
Lan16g0904 406 MobiDBLite consensus disorder prediction 18 32 - -
Lan16g0904 406 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0904 Lan-Chr16 15940414 15944967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0904 K22991 - gmx:100781692 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0904 16 15940414 15944967 Lan2g0206 2 1725597 1729210 LSH