Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0888 ATGGAAGTGTTAGCAAGGTTGATAGCAGAAAATCCAGTAGTAATCTTCAGCAAGAGTACATGTTGCATGAGTCATACAGTGAAGGCTTTGATATTTAGCTTTGGTGCCAACCCTGCAGTGATTGAAATTGATAAAATGCCAAATGGGCACCAAATAGAGAGAGCATTGATTCAACTTGGTTGCCACCCAAGTGTACCAGCAGTGTTCATAGGACAACAATTTATAGGTGGTGCTGATAAAGTCATTGGTCTCAATATTCAAAACAAGCTTGCCCAATTGCTTCTAAATGCTAAAGCTATATTTATCTGGGGCAAGTAG 318 0.3962 MEVLARLIAENPVVIFSKSTCCMSHTVKALIFSFGANPAVIEIDKMPNGHQIERALIQLGCHPSVPAVFIGQQFIGGADKVIGLNIQNKLAQLLLNAKAIFIWGK* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0888 105 PANTHER GLUTAREDOXIN 1 104 IPR011905 -
Lan16g0888 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lan16g0888 105 Pfam Glutaredoxin 13 75 IPR002109 -
Lan16g0888 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Lan16g0888 105 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 104 - -
Lan16g0888 105 CDD GRX_GRXh_1_2_like 12 93 - -
Lan16g0888 105 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Lan16g0888 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lan16g0888 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lan16g0888 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lan16g0888 105 Gene3D Glutaredoxin 2 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0888 Lan-Chr16 15687198 15687515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0888 1 102 Miscellaneous Gene Families AT4G15690 50.000 4.50e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0888 K03676 - gmx:100803979 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1053 4 15325667 15326078 Lan16g0888 16 15687198 15687515 LSH
Lan8g0659 8 8791166 8791660 Lan16g0888 16 15687198 15687515 PCT