LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan16g0885	ATGGATTTGTTGGCAAGATTTATAGCTGATAAACCAGTAGTGATCTTCAGCAAGAGCACATGTTGCATGAGTCATACAGTGAAGGCTTTAATATTCAGCTTTGGTACCAACCCTACAGTGATTGAAATTGATAAAATGCCAAATGGGCACCAAATAGAGAGAGCATTGATTCAACTTGGTTGCCACCCAAGTGTACCAGCAGTGTTCATAGGACAACAATTTATTGGTGGTGCTGATAAAGTTATTGGTCTCAATATTCAAAACAAGCTTTCCCAATTGCTTCTAAATGCTAAAGCTATATTTATTTGGGGTAGGTAG	318	0.3805	MDLLARFIADKPVVIFSKSTCCMSHTVKALIFSFGTNPTVIEIDKMPNGHQIERALIQLGCHPSVPAVFIGQQFIGGADKVIGLNIQNKLSQLLLNAKAIFIWGR*	106

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan16g0885	105	TIGRFAM	GlrX-like_plant: glutaredoxin-like family	5	101	IPR011905	-
	Lan16g0885	105	PANTHER	GLUTAREDOXIN	1	105	IPR011905	-
	Lan16g0885	105	Gene3D	Glutaredoxin	2	102	-	-
	Lan16g0885	105	ProSiteProfiles	Glutaredoxin domain profile.	1	101	-	-
	Lan16g0885	105	SUPERFAMILY	Thioredoxin-like	2	99	IPR036249	-
	Lan16g0885	105	PANTHER	MONOTHIOL GLUTAREDOXIN-S2 PROTEIN	1	105	-	-
	Lan16g0885	105	Pfam	Glutaredoxin	13	75	IPR002109	-
	Lan16g0885	105	CDD	GRX_GRXh_1_2_like	12	93	-	-
	Lan16g0885	105	PRINTS	Glutaredoxin signature	13	31	IPR014025	-
	Lan16g0885	105	PRINTS	Glutaredoxin signature	58	71	IPR014025	-
	Lan16g0885	105	PRINTS	Glutaredoxin signature	72	85	IPR014025	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan16g0885	Lan-Chr16	15672331	15677578	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan16g0885	1	102	Miscellaneous Gene Families	AT4G15690	50.000	4.76e-35	114

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan16g0885	K03676		-	gmx:100803979	176.792

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan16g0885	16	15672331	15677578	Lan8g0659	8	8791166	8791660	PCT
	Lan8g0660	8	8794274	8794822	Lan16g0885	16	15672331	15677578	PCT
	Lan20g0224	20	1497455	1498282	Lan16g0885	16	15672331	15677578	PCT