Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0883 ATGGAGGATGCCCTAGAAATTGAGAAGGCACATGAAGAAGTGATTTCAGATGAAGCACCTGAAAAGAAGCAGGAAACTCGTGATGAAATCCTTTCTCGACACAGGAAAGAGATATCACAGCTGCAGAAAAAAGAAGTCGAAATGAAAAAGTTAGCAGCTAGAGGTAGCAAGGCTGAACAGAAAGCTAAGAAAAAACAAGTGGAGGAAGAGATTTCTCAACTTTCTGCCAGGCTTAAAGTGGAACATGCAAAAGAACTGGCTGCATTAGGCTATAGTGGTGGTAATGGAAACGAAAAGAACAATGTGGACACTTTGGTGAAGGCCATAGCTGGTGTATCTGTTACTAGTCAACCTGAGCATACGAAGTCAAGCAAAGCCAAACAAAGGCGAGACAAGAGAGCTCAACAAGAAGCCGAAAGGGAGCAGAGGATTCAAGCAGAGCAGAGTGACACTGTAAGCGATCGTATGATTGAAAATGAGAAACTGGAGAAGAAGTTAAAGCCTCTCGGTTTGACTGTTAATGAAATAAAGCCGGATGGACACTGCCTCTACAGAGCTGTTGAGGATCAACTGGCCGTCCTCTCTGGGAGTATATCGCCTTATACATATCAAGAACTTAGAGGAATGGTGGCTGCATATATGAGGAAGCATTCATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTGATTGAAGCTGATTCTGATGAATCACCGGTTCAGAAATTCGAAAATTATTGTAAAGAAGTGGAGTCCACAGCAGTATGGGGAGGACAACTAGAGCTTGGTGCTTTGACTCACTGCCTGAAGAAGCATATTAAAATATTTTCTGGGTCCTTCCCAGATGTAGAGATGGGAAAGGAGTATAAATGTGAAGATGGTAATGGCTCATCTAATTTGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGTGAGCATTATAATTCTGTTGTCCCAACATGA 972 0.4198 MEDALEIEKAHEEVISDEAPEKKQETRDEILSRHRKEISQLQKKEVEMKKLAARGSKAEQKAKKKQVEEEISQLSARLKVEHAKELAALGYSGGNGNEKNNVDTLVKAIAGVSVTSQPEHTKSSKAKQRRDKRAQQEAEREQRIQAEQSDTVSDRMIENEKLEKKLKPLGLTVNEIKPDGHCLYRAVEDQLAVLSGSISPYTYQELRGMVAAYMRKHSSDFLPFFLSENLIEADSDESPVQKFENYCKEVESTAVWGGQLELGALTHCLKKHIKIFSGSFPDVEMGKEYKCEDGNGSSNLSIMLSYHKHAFGLGEHYNSVVPT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0883 323 PANTHER OTU DOMAIN CONTAINING PROTEIN 23 322 - -
Lan16g0883 323 MobiDBLite consensus disorder prediction 1 31 - -
Lan16g0883 323 MobiDBLite consensus disorder prediction 122 153 - -
Lan16g0883 323 MobiDBLite consensus disorder prediction 113 153 - -
Lan16g0883 323 ProSiteProfiles OTU domain profile. 171 323 IPR003323 -
Lan16g0883 323 Coils Coil 31 84 - -
Lan16g0883 323 Pfam OTU-like cysteine protease 177 317 IPR003323 -
Lan16g0883 323 Gene3D - 157 322 - -
Lan16g0883 323 SUPERFAMILY Cysteine proteinases 136 322 IPR038765 -
Lan16g0883 323 PANTHER DEUBIQUITINASE OTUD6B 23 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0883 Lan-Chr16 15651709 15661616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0883 K18342 - gmx:100819977 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0883 16 15651709 15661616 Lan2g0204 2 1709365 1712916 LSH