Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0875 ATGAGCAGCCAATACAAGCCTAGTGTGGATGAAGTCCACAGTGATGTGAAGGTGGTGGAGAGGTCAACAAGGGTGAGACCTTATGAAGTGTTGCTGAGATTTTTGGGACTCTCACTCACTTTGGTTGCAACCATTATTGTTGGTATTGATAAGGAGACAAAGCGCATTTCATATGCTGAAATGCACTTTGAAGTCACTGCTAAGTGGGAATACATGTCTGCTATTGTGTTTTTCTTGGTGTCAAACGCCATAGCATGCTCATATGCAGCAGCATCTCTGGTCATCACAGTTATGCCAAAAAGCAATATAAACAATAATGTAACACTCTTGGTGATAACATTAGTAGACCTTGTTATCATGGCACTTCTTTTCTCAGCCAATGGTGCAGCTTCTGCAGTTGGAGAAATAGGACAACATGGGAACTCACACGTTCAATGGTTCAAAGTGTGTAATGTGTTTGATGCATATTGTCGCCACATGACTGTTGCATTGGTCCTCTCTATCATTGGATCCACCATCTTTCTTTTGCTGGTGGCTCTTTCTATTCTCAAACTCCATTACAACAAGTAA 570 0.4158 MSSQYKPSVDEVHSDVKVVERSTRVRPYEVLLRFLGLSLTLVATIIVGIDKETKRISYAEMHFEVTAKWEYMSAIVFFLVSNAIACSYAAASLVITVMPKSNINNNVTLLVITLVDLVIMALLFSANGAASAVGEIGQHGNSHVQWFKVCNVFDAYCRHMTVALVLSIIGSTIFLLLVALSILKLHYNK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0875 189 PANTHER CASP-LIKE PROTEIN 1E1 11 187 - -
Lan16g0875 189 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 31 184 IPR006459 -
Lan16g0875 189 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 11 187 - -
Lan16g0875 189 Pfam Casparian strip membrane protein domain 24 171 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0875 Lan-Chr16 15592981 15594665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0875 - - gmx:100817307 268.47