Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0873 ATGATGAAGAATCAACCTTCACAGTGGTGGTGGCTTGATAACAACAACACTGCTAAAAGATCCTCATGGCTTCAATCCACTCTAGCAGAGTTAAATGAGAAGACAAAGAAAATGTTAAAATTAATTGAAGAAGATGCAGATTCTTTTGCCCAACGTGCTGAAATGTATTACAAGAAAAGACCAGAACTTGTGATCATGGTTGAAGATTTCTATAGAACACACCGATCACTAGCTGAACGCTACGATCAAATCAAACCCGAAACCGGAATCGGCTTCCTCACCGCAGTAGGAGGATCCCCTTTTGCTTCTGCTAAGCATCAGATAGAGAAGTTGATGAGTTTTGCAGATAATGGTTATGATACATACTCTGAGAATTGTTACACGGAGGATTGTACTGAATCTGAAGTTGATGATCCTGAACTAGAGGAAGAAGAAAACATAAAAGAGAATCATGTTTCATTTATGGCTGTTAATGATGATGAAGTGATGAAGCTGAATGATGAAATTAAGAGACTCAATGAAGAGAAAAAGAATCATAATGATCAAATGAAGCAGAAAGATGCTATTTGTGATGAAGTGATGAAGTTGAGGGAAGAAATGAGAAGAATTAGAGAAGAAAATAAGATACAAATGGAACAACTTAAGCAGAAAGATGAAGAGAAATTGGAGGTAATAAGACAACTGAGTTTGACTATTGATATGATGAAACAAGAGAATGTGAAGATGAGAAACTTCATTGCTAAAGAGGGTACCAAAAAATTGAAGAAGAACCCATTTGAGTTCAGCAAATTTGTTGAAGCATTTTCAGGGAAATTGTTTAATAATGGTACTTCAAAGAATGAGCCATGTGTTGAACTCTCTAAACGTGAATTGTTTATCCACGATTCACTTTTATCATCCCATTCCAAACCTCTTCTTCTGTTACTGTCACAATACACCAACGTTCTTCTTTTTTATCAATTCTTCACAGTACTCATTCTCATTTACCAACACTTGTTAGGTCCCATCCTCATCCATTGGCAGAATCTAATAATGAAGAATCAGACTCAGAGCCATGAAATCAAGAAGAAGAAGATGGCTACAATGATGAAGAATCAACCTTCACAGTGGTGGTGGCTTGATAACAACAACACTGCTAAAAGATCTTCATGGCTTCAATCCACTCTAGCAGAGTTAAATGAGAAGACAAAGACAATGTTAAAATTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCTGAAATGTATTACAAGAAAAGACCAGAACTTGTGAACATGGTTCAAGATTTCTATAGAACACACCGATCACTAGCTGAACGCTACGATCAAATCAAACCCGAAACCGGAATCGGCTTCCTAACCACAGTAGGAGGATCCCCTTTTGCTTCTGCTAAGCATCAGATAGAGAAGTTGATGAGTTTTGCAGATAATGGTTATGATACATACTCTGAGAATTGTTACACAGAGGATTGTACTGAATCAGAAGTTGATGATCCTGAACAAGAAGAGGAAGAAGAAAACATAAAAGAGAAGCATGTTTCATTTATGGCTGTTAATGAAGAAGTGATGAAGCTGAATGATGAAATTAAGAGACTCAATGAAGAGAAAAAGAATGATAAGGATCAACTGAAGCAGAAAGATATCATTTGTGATGAAGTGATGAAGTTGAGGGAAGAAATGAAAAGACTCGGGGAAGAAAATAAGACACAAATGGAACAACTTAAGCAGAAAGATGAAGAGAAATTGGAGGTAATAAGACAACTGAGTTTCACTATAGATATGATGAAACAGGAGAATGTGAAGATGAGAAACTTCATTGCTAAAGAGGGTACCAAGAAATTGAAGAAGAACCCATTTGAGTTCAGCAAATTTGTTGGAGCATTTTCAGGGAAATTGTTTGATAATGGTACTCCAGAGAATGAGCCATGGGTTGAACTCTCTAAACTTGGTTAA 1956 0.3661 MMKNQPSQWWWLDNNNTAKRSSWLQSTLAELNEKTKKMLKLIEEDADSFAQRAEMYYKKRPELVIMVEDFYRTHRSLAERYDQIKPETGIGFLTAVGGSPFASAKHQIEKLMSFADNGYDTYSENCYTEDCTESEVDDPELEEEENIKENHVSFMAVNDDEVMKLNDEIKRLNEEKKNHNDQMKQKDAICDEVMKLREEMRRIREENKIQMEQLKQKDEEKLEVIRQLSLTIDMMKQENVKMRNFIAKEGTKKLKKNPFEFSKFVEAFSGKLFNNGTSKNEPCVELSKRELFIHDSLLSSHSKPLLLLLSQYTNVLLFYQFFTVLILIYQHLLGPILIHWQNLIMKNQTQSHEIKKKKMATMMKNQPSQWWWLDNNNTAKRSSWLQSTLAELNEKTKTMLKLIEEDADSFAQRAEMYYKKRPELVNMVQDFYRTHRSLAERYDQIKPETGIGFLTTVGGSPFASAKHQIEKLMSFADNGYDTYSENCYTEDCTESEVDDPEQEEEEENIKEKHVSFMAVNEEVMKLNDEIKRLNEEKKNDKDQLKQKDIICDEVMKLREEMKRLGEENKTQMEQLKQKDEEKLEVIRQLSFTIDMMKQENVKMRNFIAKEGTKKLKKNPFEFSKFVGAFSGKLFDNGTPENEPWVELSKLG* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0873 651 Pfam KIP1-like protein 9 82 IPR011684 GO:0003779
Lan16g0873 651 Pfam KIP1-like protein 370 443 IPR011684 GO:0003779
Lan16g0873 651 Coils Coil 155 220 - -
Lan16g0873 651 Coils Coil 24 44 - -
Lan16g0873 651 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 368 449 IPR011684 GO:0003779
Lan16g0873 651 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 88 IPR011684 GO:0003779
Lan16g0873 651 PANTHER PROTEIN NETWORKED 3A-RELATED 368 639 - -
Lan16g0873 651 PANTHER PROTEIN NETWORKED 3A-RELATED 7 279 - -
Lan16g0873 651 PANTHER PROTEIN NETWORKED 4A 368 639 - -
Lan16g0873 651 PANTHER PROTEIN NETWORKED 4A 7 279 - -
Lan16g0873 651 Coils Coil 516 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0873 Lan-Chr16 15543788 15553390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0873 - - lang:109329363 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0873 16 15543788 15553390 Lan8g0662 8 8807222 8809390 PCT
Lan16g0873 16 15543788 15553390 Lan4g1676 4 25574093 25576317 PCT
Lan8g0662 8 8807222 8809390 Lan16g0873 16 15543788 15553390 PCT
Lan4g1676 4 25574093 25576317 Lan16g0873 16 15543788 15553390 PCT