Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0674 ATGGATGCTTTATCTAAGAAGAGTGAAAATTTTCAAAAGGAAAAAGATGGGGTGAGGTCAAGTTATGGTAATGGAGCTAAGAGTGAGTGCTTAACTGATTCCAATGCAGAGTCTAGAGATACCAGTTTCAGTGGATCAAGCTCCTCAGGTTCCACTGAAGTAGCAAAAGCTATAGGGTCTTCTTCTTCTTCTCCTCCTTCTCTTGGCTGGCCTATTCTAAAGGCTGCAGTCTCCAAGTGTTTGAAATCTGATGAAAAAGAAAATCAACATAAGACCCACTTGGTGGAAGATGCAAAATTTAGTACTATCAGTTCAAAAATTTCTGAAATTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCAAATGCTATTACTAATCTTTGTGCCACTGTATTTGGGCAATTGTGGAGACTAGAACCTCTCCCTTGTGAAAAGAAAGCAATGTGGCAGAGAGAGATGGAATGGTTTGTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATGCCCAGACGGAAGCAAGGTCGAGGTAATGTCATGCAGGCCTAGGACAGATATCTTTATCAACATACCAGCTCTTCGTAAACTCGACAACATGCTTCTCGAAATATTAGGTAGTTTTACCACTACAGAGTTTTGGTATGTTGACCAAGGAATTGTTGCCCCGGACGCAGATGGTTCAGCCTCTTTTCGTAGAACGATCCAGCGGCAAGAAGAGAAGTGGTGGCTCCCTGTGCCTCGTGTTCCCCCTGCAGGTCTCAGTGAGAACTCGAGAAAGCAGTTGAATAACTCTCGAGAATGTGCACACCAAATACTAAAGGCAGCCATGTCTATCAATGGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTAGCAGAAGCCCTTCCTAAGAACGGAAGAGCTTGCCTGGGGGATTTTATTTATCGTTACATAACATCGGATCAATTCTCCCCGGAGTGCCTGCTTGATTGCCTAGACCTCTCCTCTGAACATGTCGCACTAGAGATCGCGAATCGTGTGGAAGCTGCAATTCATGTATGGCGTAGAAAAGCTCACTCCAGACCCCCACAAACTCCCAACCGTTCTACTACAAAGTCATCCTGGGAGATAGTCAAGGACTTTATGGCTGATGGAGATAAGAGAGAACAGCTAGCTGAAAGAGCTGAAAACATTCTACTTTCTTTGAAGCAGCGATTCCCAGGCTTAACTCAAACTGCCTTGGATACCAGCAAGATTCAGTGCAACAAGGATGTTGGCAAATCCATTCTAGAGAGCTATTCAAGAGTTTTGGAGAGCATAGCCTTTAACGTTGTAGCTCGCATTGATGATTTGCTATATGTGGATGACCTGACCAAACATTCAGATAGGTGTCCACTGGCTTCACCACAAACGGTTTCTTCACGTCGATTCTCGGTGTCTGTCTCAGGCACTCCACACAAAGCAGCAGCAGCAATAGACACACCTAGCTTTTCATCTAAGCCACTTATCAGTCCTGCAAGAGGGGAGAAAACTCCTTTCCTCCACAACAATAACAATGGAATCAAACCTCATCGTCGCGGCTTTGGGGTCAGAAGAGTTTTATCAAATTATCTTGGAGCCGAGACAAAAACATTACAACCTGAACATCAGAAGGATTCATGTACCTCAAAGAACAAGACAAAATGA 1740 0.4351 MDALSKKSENFQKEKDGVRSSYGNGAKSECLTDSNAESRDTSFSGSSSSGSTEVAKAIGSSSSSPPSLGWPILKAAVSKCLKSDEKENQHKTHLVEDAKFSTISSKISEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWQREMEWFVSVSDHIVELIPSWQTCPDGSKVEVMSCRPRTDIFINIPALRKLDNMLLEILGSFTTTEFWYVDQGIVAPDADGSASFRRTIQRQEEKWWLPVPRVPPAGLSENSRKQLNNSRECAHQILKAAMSINGIALAEMEVPESYLAEALPKNGRACLGDFIYRYITSDQFSPECLLDCLDLSSEHVALEIANRVEAAIHVWRRKAHSRPPQTPNRSTTKSSWEIVKDFMADGDKREQLAERAENILLSLKQRFPGLTQTALDTSKIQCNKDVGKSILESYSRVLESIAFNVVARIDDLLYVDDLTKHSDRCPLASPQTVSSRRFSVSVSGTPHKAAAAIDTPSFSSKPLISPARGEKTPFLHNNNNGIKPHRRGFGVRRVLSNYLGAETKTLQPEHQKDSCTSKNKTK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0674 579 MobiDBLite consensus disorder prediction 563 579 - -
Lan16g0674 579 MobiDBLite consensus disorder prediction 25 66 - -
Lan16g0674 579 MobiDBLite consensus disorder prediction 1 16 - -
Lan16g0674 579 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 108 477 IPR005512 GO:0005085
Lan16g0674 579 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 15 565 IPR038937 GO:0005085
Lan16g0674 579 MobiDBLite consensus disorder prediction 1 66 - -
Lan16g0674 579 Gene3D PRONE domain, subdomain 1 343 482 - -
Lan16g0674 579 Gene3D PRONE domain, subdomain 1 102 342 - -
Lan16g0674 579 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 15 565 - -
Lan16g0674 579 MobiDBLite consensus disorder prediction 559 579 - -
Lan16g0674 579 ProSiteProfiles PRONE domain profile. 100 483 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0674 Lan-Chr16 8920575 8925050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0674 - - gmx:100780972 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0674 16 8920575 8925050 Lan9g1309 9 20359513 20362722 PCT
Lan9g1309 9 20359513 20362722 Lan16g0674 16 8920575 8925050 PCT