Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0658 ATGGAGGCCAATTCCCAATCATCAGGTGCAGGGAGCAATACAAATAGACCCTCAAGATGGTTACTCAATGGAATGACTGCTCTTGTTACTGGTGGAACCCGTGGAATTGGGCATGCCATAGTGGAAGACTTATGTGGGTTTGGTGCCACCGTTTACACTTGTTCTAGAAATGAAGCAGAGTTGAATAAGTGCCTAGATCAGTGGAGAATTAAGGGTTTTCTGGTTTATGGGTCAGTGTGTGATGTGTCAACACGACCTCAAAGAGAAAAGCTCATTCAAGAAGTGGCCTCCACCTTCAATGGCAAGCTTAACATTTATGTAAACAATGTAGGAAATAACTTTAGGAAGCCAACCATTGAGTACACTGCTGAAGATTATTCAGAGCTGATGACAGTAAATTTAGACTCTGCATTCCATCTCTGCCAATTAACATATCCTCTTCTAAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCTGTTGCAGGTGTCACCAGCTTGGGCACTGGATCAGTCTATGCAGCAAGTAAAGCTGCAATTAATCAGCTTACAAAAAATCTGGCATGTGAATGGGCAAAAAATAACATAAGGAGCAACTGTGTTGTACCTTGGGCAACAAGAACCCCACTTGTAGAACATTTGTTTCAGAACCAAAAGTTTGTAGATGATATTATGTGTAGAACTCCACTTAAGCGCATTGCAGAACCTGAAGAAGTGTCATCATTGGTAACTTTCCTTTGCTTACCTGCTGCTTCTTACATCACTGGACAAGTTATTTGTGTTGATGGAGGATTAACTGTCTTTGGATTTCAACCCAGCATGAGAATTACCTAA 837 0.4122 MEANSQSSGAGSNTNRPSRWLLNGMTALVTGGTRGIGHAIVEDLCGFGATVYTCSRNEAELNKCLDQWRIKGFLVYGSVCDVSTRPQREKLIQEVASTFNGKLNIYVNNVGNNFRKPTIEYTAEDYSELMTVNLDSAFHLCQLTYPLLKASGMGSIVFISSVAGVTSLGTGSVYAASKAAINQLTKNLACEWAKNNIRSNCVVPWATRTPLVEHLFQNQKFVDDIMCRTPLKRIAEPEEVSSLVTFLCLPAASYITGQVICVDGGLTVFGFQPSMRIT* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0658 278 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 9 275 - -
Lan16g0658 278 Pfam Enoyl-(Acyl carrier protein) reductase 33 267 - -
Lan16g0658 278 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 161 189 IPR020904 GO:0016491
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 26 43 IPR002347 -
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 101 112 IPR002347 -
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 148 164 IPR002347 -
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 174 193 IPR002347 -
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 195 212 IPR002347 -
Lan16g0658 278 PRINTS Glucose/ribitol dehydrogenase family signature 230 250 IPR002347 -
Lan16g0658 278 Gene3D - 16 270 - -
Lan16g0658 278 PANTHER TROPINONE REDUCTASE 9 275 IPR045000 GO:0016491
Lan16g0658 278 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 IPR002347 -
Lan16g0658 278 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 IPR002347 -
Lan16g0658 278 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 IPR002347 -
Lan16g0658 278 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 269 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0658 Lan-Chr16 8638668 8643035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0658 19 273 Miscellaneous Gene Families AT2G29290 60.700 4.88e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0658 K08081 - gmx:100791265 462.225