Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0648 ATGGCTGCTTCACTTTCCACTGTTGCAGCTGTTAACAGAACTCCACTGAACTTCAATGGCACTGGAGCTGGACCAGTTCCCAGCTCAAGCTTCTTTGGCAGCAACTTGAAGAAGGTTACCTCAAGACTACCCAACACAAAAGTTTCCTCTGGAAGCTTCAAAGTTGTTGCTGTTGAAGAGATTGACCCTAAAAAGCAAACTGACAATGATAGATGGAGGGGTCTTGCCTATGATGTTTCAGATGATCAGCAAGATATCACAAGAGGGAAGGGTATGGTTGATTCCCTTTTCCAAGCTCCTCAAGATGCTGGTACACACTATGCAGTCATGAACTCCTATGAGTACATCAGCACCGGGCTTCGCCAGTACAACTTGGATAACACCAAGGATGGGTTTTACATTGCCCCTGCCTTTATGGACAAGCTTGTTGTTCATGTCACCAAGAACTTTATGACCCTACCCAACATCAAGGTTCCGCTCATTCTTGGTATTTGGGGAGGCAAGGGTCAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTTCCAAGCTGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTAGAAAGTGGAAATGCAGGAGAGCCTGCAAAACTGATCAGGCAGAGATACCGTGAGGCTGCTGATATAATCAGGAAGGGAAAGATGTGTGCTCTCTTCATCAATGATCTTGACGCAGGAGCCGGTCGTATGGGTGGAACCACACAATACACTGTGAACAACCAAATGGTTAATGCGACTCTCATGAACATTGCTGATAATCCTACAAATGTGCAGCTCCCTGGTATGTACAACAAAGAAGATAACCCCCGTGTTCCCATCGTTGTCACGGGTAACGATTTCTCAACATTGTATGCTCCTCTTATCCGTGACGGGCGTATGGAAAAGTTCTACTGGGCACCTACAAGGGATGACCGTATTGGTGTTTGCAAAGGAATTTTCCGCAGCGACAATGTCGCTGAGGATGACGTTGTCAAGATTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTCCGGGCCAGAGTTTACGACGACGAAGTGAGGAAGTGGATTGGTACTGTTGGTGTTGATGGCATTGGGAAAAGGCTTGTGAACTCAAAGGAAGGACCACCAACCTTTGAGCAGCCAAAGATGACATTGGAGACACTCTTAGGATATGGTAACATGCTTGTCCAAGAACAAGATAATGTGAAGAGAGTTCAATTGGCAGACAAGTACTTGAATGAGGCTGCTCTTGGTAATGCTAATGAAGATGCTATCAAAAGTGGATCTTTCTTCCAATCCTAA 1320 0.4576 MAASLSTVAAVNRTPLNFNGTGAGPVPSSSFFGSNLKKVTSRLPNTKVSSGSFKVVAVEEIDPKKQTDNDRWRGLAYDVSDDQQDITRGKGMVDSLFQAPQDAGTHYAVMNSYEYISTGLRQYNLDNTKDGFYIAPAFMDKLVVHVTKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRSDNVAEDDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWIGTVGVDGIGKRLVNSKEGPPTFEQPKMTLETLLGYGNMLVQEQDNVKRVQLADKYLNEAALGNANEDAIKSGSFFQS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0648 439 Gene3D - 309 421 - -
Lan16g0648 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 332 IPR027417 -
Lan16g0648 439 PANTHER - 1 437 IPR044960 -
Lan16g0648 439 Pfam ATPase family associated with various cellular activities (AAA) 164 305 IPR003959 GO:0005524|GO:0016887
Lan16g0648 439 Gene3D - 124 308 IPR027417 -
Lan16g0648 439 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0648 Lan-Chr16 8532374 8536268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0648 - - gmx:100818034 780.785