Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0647 ATGTGTTCAAATTTGGAACCAGTGCCAATTACACCCCAAAAACATGATCCAGCATGGAAGCATGTTCAGATGTTTAAGAATGGTGAAAAGGTGATGTTGAAATGCATATATTGTCTTAAGATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACATCTTGCTTGTCAGAAAGGTAATGCATCCACTTGCTGTAGGGTACCCCATGATGTTAGGCTTAGTATGCAGCAGAGTTTGGATGGGGTTGTTGTGAAAAAGAGGAAGAAACAAAGAATTGAAGAAGAGATTATGAATGTTGCTCCTTTAGCTACTGCTGTTCATAACACTGTTGCTAATCAGGTTGATGTGAGTGAAGGATTTCAATCCATTGGAGTACAGAATTCAGTGGAACATAATTCTAGTATGTTACTGAATCATATTGAAGGAGTTAGTAAAGGTGTAGAAAGAAGGAAGAAGTTGAGAGCCAGCAAGAATTATACGAAGTCTGATGCTGCTATGGAGAAAAATGCAGTGTTCCTGAAGAAGGTGGACAGTCGCATTCACATGGCAATAGGTCGGTTTTTGTATGATATTGGTGCACCTTTTGATGCTGTGAACTCAATCTATTTTCAGGAAATGGTTGAAGCAATTGCTTCGGGAGGTTCTGGAATTGAACGTCCCTCACGTAATGAAATTCGGGGTTGGGTCCTGAGAAACTCTGTTGAAGAAGTGAAGAATGATATAGATAGATGCAAGATGACATGGGGGAGGACTGGCTGTTCTATTTTGGTTGACCAGTGGAGTACAGACTCGGGTAGAACACTGCTATGTTTTTTGGCGTATTGTCCCGAAGGAATAGTCTTTTTGAAATCACTGGATGCAACTGAGATTATGGCTTCGTCTGAATATTTATTTGAGTTGATAAAACAAGTAGTAGAAGAAGTTGGAGTTGGGCAAGTGCTGCAAGTCATTACATCTGGCGAAGAACAATATGCTGCTGCTGGGAAACAGCTGACAGATACTTTTCCTACCCTTTATTGGAGCCCTTCTGCAGCTCATTGCATTGATTTGATACTTGAAGATATTGGAAATCTCGAGTGGATTGGTGCAGTGATTGAACAAGCTAGATCTATAACAAGATTTGTCTACAATCATAGTGCAGTCTTGAATATGGTTAGAAGGTATACATTAGGGAATGATATTGTGGATCCCTCTATCTCGCGCTTTGCTACAAACTTTACCTCATTGAAGCGAATGGTTGACCTTAAACACAATTTACAGGCCATGGTCACTTCTCAGGAGTGGATGGATTGTCCATATTCGAAGAAAACAGCAGGTCTGGAATTGTTAGACTGCTTAAGTAATCAAACATTTTGGTCTTCATGTGAAATGATAGTTCGTCTAACAGCTCCTCTCTTGCGTGTTCTGAGAATAGCTGCTAGTGAGATGAGACCTGCAATGGGGTATATTTATGCTGGAATGTACCGGGCAAAAGAAGCAATTAAGAGAGAACTTGTTAAGCGGGAGGATTATACAGTGTACTGGAATATTATACATCATAGATGGGAAAGGCTGTGGTATCATCCTCTTCATGCTGCAGGCTTCTTCCTTAATCCTAAGTTTTTCTATAGTATTCAAGGGGATATGCACAATGAAATTCTCTCCGGGATGTTTGATTGCATAGAGAGATTGGTACCTGATACAAGAGTCCAAGATAAAATTACCAAAGAGATAAACTTATACAAGACAGCTGCAGGAGATTTTGGGAGAAAGATGGCAGTAAGAGCAAGAGATAACCTGCTTCCTTCCGAGTGGTGGTCAACTTATGGAGGAGGCTGCCCTAACTTGTCGCGTTTAGCAATTCGTATTCTAAGTCAAACATGCAGCATGGTGTCTTGCAAAAGAAACCAAATTCCTTTTGAACAAACAATGCATACACGGAATCATATAGAGCGCCAACATCTTACTGATCTCGTCTTTGTTCATTACAACTTACGATTAAGACAAATGTTTATGAGTAAAGAACAAAACTTTAGCGATCCCCTATCATTTGACCATGTTAGTAATGTTGACGAGTGGATCCAGGCAAAGGATTTAGACGAAGAAGAATATGGCTCGAATTGGATGACGCTGGATCCAGCTTCTGTAAACACAATGCTTTTAAGGCCTTTAAATGATGAAGCTGAAGAATTGGGTGAAGGGTTTGATGATCATGAAATTTTCAGTTGTATGAAAGACTGCGACGATGAAAATGCCAGTAAACCATTACCCATTGATCAAAATAACCATGCTTTTGTATCTGAAACATGA 2289 0.3997 MCSNLEPVPITPQKHDPAWKHVQMFKNGEKVMLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCCRVPHDVRLSMQQSLDGVVVKKRKKQRIEEEIMNVAPLATAVHNTVANQVDVSEGFQSIGVQNSVEHNSSMLLNHIEGVSKGVERRKKLRASKNYTKSDAAMEKNAVFLKKVDSRIHMAIGRFLYDIGAPFDAVNSIYFQEMVEAIASGGSGIERPSRNEIRGWVLRNSVEEVKNDIDRCKMTWGRTGCSILVDQWSTDSGRTLLCFLAYCPEGIVFLKSLDATEIMASSEYLFELIKQVVEEVGVGQVLQVITSGEEQYAAAGKQLTDTFPTLYWSPSAAHCIDLILEDIGNLEWIGAVIEQARSITRFVYNHSAVLNMVRRYTLGNDIVDPSISRFATNFTSLKRMVDLKHNLQAMVTSQEWMDCPYSKKTAGLELLDCLSNQTFWSSCEMIVRLTAPLLRVLRIAASEMRPAMGYIYAGMYRAKEAIKRELVKREDYTVYWNIIHHRWERLWYHPLHAAGFFLNPKFFYSIQGDMHNEILSGMFDCIERLVPDTRVQDKITKEINLYKTAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTCSMVSCKRNQIPFEQTMHTRNHIERQHLTDLVFVHYNLRLRQMFMSKEQNFSDPLSFDHVSNVDEWIQAKDLDEEEYGSNWMTLDPASVNTMLLRPLNDEAEELGEGFDDHEIFSCMKDCDDENASKPLPIDQNNHAFVSET* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0647 762 PANTHER OSJNBA0013A04.12 PROTEIN 7 725 - -
Lan16g0647 762 Pfam Protein of unknown function (DUF 659) 220 371 IPR007021 -
Lan16g0647 762 Pfam hAT family C-terminal dimerisation region 586 658 IPR008906 GO:0046983
Lan16g0647 762 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Lan16g0647 762 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 725 - -
Lan16g0647 762 SUPERFAMILY Ribonuclease H-like 252 660 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0647 Lan-Chr16 8474940 8479159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0647 - - aprc:113850304 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0183 4 2978469 2982264 Lan16g0647 16 8474940 8479159 LSH