Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0629 ATGGATTCTTCTATCGACACAAAAAACACCACTCCCCACATTGGTGGTTCCATCACAAACATGGATCAAATTCATATGGATGCTCCCACCAGAGATTTCCTTCAAATGTATCAAGCCCAACACCATACTCCTTCTTCTTCTCGCCCTCGACCGCAGCCGAGATTTCAAGCTCAACGACCTCAACGGCTTCCGAGATTTCAAGACCAACGCTCTCAACGGCTTCCGAGATTTCAAGACCAACGCTTTCAACGGCTTCCGAGATTTCAAGACCAACGCCCTCAACGGCTGCCGAGATTTCAAGAACAACGCTCTCAACGGTTTCCGAGATTTCAAGCTCAAAGCCCTCAAGAGCTTCAACGTCCTCAAGAGCTTCAAAGCTCTCAACAGCTTCAAAGCCCTGAGCAGCTTCAAAGCCCTGAGCAGCTTCAACGCCCTCAACAGCTTCAACGCCCTCAACGGCTGCCGAGGTTTCAACCTCAACGCCCTCAACGGCCGCGGAGATTTCAAGCTCAACGCCCTCAACAGGCGCGGAGATTTCAAACTCAAAGCCCTTGGCCGCCGCCGAAAGCCCAGGCTGGAGGCCCTCTATCGCTGCCGAAAGCCCAGGCTGGAGGCCCTCTATCGCTGCTGAAAGCCCAGGCTGGAGGCCCTCCACCACAGACGAAAGCCCAGGCTGGAGGCCCTCCACCGCAGCAGAAAGCCCAGGCTGGCGGCCCTCCACCACAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAAGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAAGCTGAAGCTGAAGGCCCTCCACCGCAGCAGCCGAAGGCTGAAGCTCCAGCTCCAGGCCCTCTGCCACCGCCGAAAGCTCAAGCTCAAAGCCTTCATGCTTCTGCTACCAAGGTTCAGCATTCTCAGTCACCAGCTGAAACTGTTGCTGCTACTACTACCACTGCTCCTAATCTCATATCTAGTAGATTGTTCTTACCAGATTTACCAGAACACCAGTTGTATAAAAATCGCTTGCAAGACTTCACCCAGAAGTTGAGAATTCAGTTTCCAAAGTACCAAACAGTCAGTGAGGGTTCTAGGCATCTTTCAAAGTTTAGGTCGACAGTATGGGTGAGTGGAAATTGTTACACCAACCAAGTTCCCTTCTTTAACCGAAAAGCTGCTGAACAGGATGCAGCTAAACTAGCTTTGGAGAGTCTATCTGCAATGATTAAAGGTGAAGCTCCGCCTGTAGTAATTAAAGATGAAGCAAGGTCTCTTGTTTTGGAGGAAACTTGGCTTTCCAAGTCTATCTTGAATGACTATGCTTATAAGTTGAATGTAGCATTGCCTACTTATAGCACTGTTGAGACCCCTGGGGTGAAGCCTGTTTTTGTATCTACTTTGGTTTTCAATGGTTCAAAGTACACCGGTGATGCTTCTGGACACAAAAAAGCGGCTGAGCAGCTAGCAGCTTGTCGAGCTATTCTTTCAATTCTATCAGCTGATCCTGGCTCAGAATCACTTTCTGAGATTCTAAAGTTAAAGACTGGATTTACTCCTGCAGTAACAAAAATAATTGATTCTACTAATCTATCAGCTACAGTAGAAAATACAGGGCATGCCTCTCATTCACTGGACCTTAACATGACAGTTGCAGGTTTAGAACAGCCTATTGGTGAAGCCCCAACTTCAAAAAAACGACGAAAGAGCAAAAAGAAGGCTAATAAGAAGGCGCGGTTGGAAACTCCGTTACTGGTTGCCACTGCAGTTCCTATGGATGAAATGCCTCCTTGTTCAATGGCGCAGTGA 2034 0.5128 MDSSIDTKNTTPHIGGSITNMDQIHMDAPTRDFLQMYQAQHHTPSSSRPRPQPRFQAQRPQRLPRFQDQRSQRLPRFQDQRFQRLPRFQDQRPQRLPRFQEQRSQRFPRFQAQSPQELQRPQELQSSQQLQSPEQLQSPEQLQRPQQLQRPQRLPRFQPQRPQRPRRFQAQRPQQARRFQTQSPWPPPKAQAGGPLSLPKAQAGGPLSLLKAQAGGPPPQTKAQAGGPPPQQKAQAGGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAEGPPPQQPKAEAPAPGPLPPPKAQAQSLHASATKVQHSQSPAETVAATTTTAPNLISSRLFLPDLPEHQLYKNRLQDFTQKLRIQFPKYQTVSEGSRHLSKFRSTVWVSGNCYTNQVPFFNRKAAEQDAAKLALESLSAMIKGEAPPVVIKDEARSLVLEETWLSKSILNDYAYKLNVALPTYSTVETPGVKPVFVSTLVFNGSKYTGDASGHKKAAEQLAACRAILSILSADPGSESLSEILKLKTGFTPAVTKIIDSTNLSATVENTGHASHSLDLNMTVAGLEQPIGEAPTSKKRRKSKKKANKKARLETPLLVATAVPMDEMPPCSMAQ* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0629 677 MobiDBLite consensus disorder prediction 370 391 - -
Lan16g0629 677 Pfam Double-stranded RNA binding motif 509 570 IPR014720 -
Lan16g0629 677 Pfam Double-stranded RNA binding motif 415 481 IPR014720 -
Lan16g0629 677 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 406 652 - -
Lan16g0629 677 PANTHER RIBONUCLEASE III 406 652 IPR011907 GO:0003723|GO:0004525|GO:0006364
Lan16g0629 677 Gene3D - 400 485 - -
Lan16g0629 677 Gene3D - 497 577 - -
Lan16g0629 677 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 414 483 IPR014720 -
Lan16g0629 677 SMART DRBM_3 509 574 IPR014720 -
Lan16g0629 677 SMART DRBM_3 415 482 IPR014720 -
Lan16g0629 677 MobiDBLite consensus disorder prediction 1 18 - -
Lan16g0629 677 MobiDBLite consensus disorder prediction 100 156 - -
Lan16g0629 677 SUPERFAMILY dsRNA-binding domain-like 509 573 - -
Lan16g0629 677 MobiDBLite consensus disorder prediction 631 655 - -
Lan16g0629 677 MobiDBLite consensus disorder prediction 36 54 - -
Lan16g0629 677 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 508 575 IPR014720 -
Lan16g0629 677 MobiDBLite consensus disorder prediction 244 366 - -
Lan16g0629 677 SUPERFAMILY dsRNA-binding domain-like 410 481 - -
Lan16g0629 677 MobiDBLite consensus disorder prediction 1 391 - -
Lan16g0629 677 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0629 Lan-Chr16 7994739 7998966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0629 - - lang:109328842 582.793