Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0205 ATGGCTTTGCAGAAATATGTTCCTTCTGGTGATGCACCAAATGTGAAAATAAAGCGTCTGACTTTTTCCAGGAACGTGTCTGAGAAACCTCAGCTAGAGATGGCAATTCAGAATCATGACCCGGATATGGATGTTGACCTTAGGGAAGTTTATTTTCTCATTTTGCAGTTTCTTTCTGCTGGGCCTTGTCGAAAGACTCGTGTACAGTTATGGAATGAGCTTCTTGAACATCAACTTTTACCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGGTACGTAGTGGAGATGAAGATGATGATGGTCTATCATTGCCTCTAAGTTACAATATGTTGGTGGAGAGGTACCCCCATGTTGAAAAGGATCACTTGGTAAAGCTTTTAAAGCAGTTGTTACTAAATACGGCCTCCCCATCACTGGGCACGAGTAGTGGAAATGCTCCAAATGCAGCTGATGTACCTACTCTTCTAGGGACGGGTTCATTTTCACTTGTATGTGATGACAAGGATAAAATGAACGGGGAGGTCAAACGACCATCTGCTCACATGCGCTGGCCTCATCTGAAAGCTAATCAGGTTCATGGGCTTAATTTGAGGGAAATTGGGGGTGGTTTCCCTAGACACCATCGTGCACCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCTACCATGGTACAGAAGATGCAAAATATGAAGCGATTAAGAGGACACCGCAATGCTGTCTATTGTGCTATATTTGATCGGTCAGGGAGATATGTGATTACTGGTTCAGATGATCGACTTGTAAAAATTTGGTCAATGGAAACTGCATATTGTTTGGCTAGTTGCCGCGGACATGATGGTGACATCACGGACTTGGCTGTCAGTTCAAACAATGCTTTAGTTGCATCTGCATCCAACGACTGTGTTATTCGAGTTTGGCGCTTGCCAGATGGCTTACCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACAGCCATGGCATTTAGCCCCAGACCTAGTGCCGCATACCAGCTTTTATCTTCCTCTGATGATGGAACCTGTAGGATATGGGATGCAAGGTATACCCAGTCAACTCCAAGAATATTTGTTCCAAAGCCTTCAGATTCTGTAATTGGGAAAAGCAGTGGCCCCTCTACAAGCACTTTGCCACAGAGCCATCAGATCTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTTGTCACGGGTAGCTCTGACAATCTTGCCAGGGTCTGGATTGCTTGTAAACTAAGTGTGAATGATACTGACCAACCAAATCATGAGATTGATGTGCTATCTGGGCATGAAAATGATGTTAATTATGTGCAATTTAGTGGATGTGGTGTACCACCAAGATTTTCCACGGCAGAAACTTGGAAGGAGGAAAATATTCCCAAATTTAAGAATTCCTGGTTGAATCATGACAATATTGTTACCTGCTCTCGTGATGGGAGTGCTATTATATGGATTCCTAAATCTCGCAGGTCACATGGAAAAGGTGGACGCTGGACACGGGCCTATCATCTGAGAGTTCCACCTCCACCTATGCCTCCTCAACCTCAGAGAGGTGGTCCCCGTCAGAGAATTTTACCAACCCCACGTGGTGTAAATATGATTGTTTGGAGCCTAGACAACCGGTTTGTCCTTGCAGCTATTATGGATTGCAGAATCTGTGTTTGGAATGCGTCTGATGGCAGCTTAGTACACTCATTAACTGGACATACTGAGTCTACTTATGTTCTGGATGTTCATCCTTTTAATCCCCGGATAGCTATGAGTGCTGGGTATGATGGAAGAACTATTGTGTGGGATATATGGGAAGGCATTCCTGTCCGTATATATGAGACATCTCGTTTCAAGTTGGTTGATGGGAAGTTTTCTGCGGATGGGACATCAATTATACTTTCAGATGATGTTGGCCAGCTATATACATTAAGCACGGGTCAAGGTGAGTCCCAGAAAGATGCCAAATATGATCAGTTCTTTCTAGGTGATTATCGACCTCTCATTCAAGATACCCATGGTAATGTACTTGACCAGGAAACTCAGATTATTCCGTATCGACGGAATCTGCAGGATTTGCTTTGTGATTCAGCAATGATTCCTTACCCAGAACCATATCAGAGTGAATTTCAGCGAAGACGATTAGGAGCTTTAGGCCTTGAGTGGCGCCCATCATCACTTAGACTTGCTATTGGTCCTGACTTCAGCTTGGACCCTGATTATCATATGCTTCCTCTGGAAGACTTGGATGTGCTTATAGAACCCCTTCCAGAGTTTATAAATGCCATGGATTGGGAGCCAGAAATCGAAGTGTTTAGTGATGATGCAGATTCAGAATATAATGTTACTGAAGACAGCTCTTCTAGGGGTGAGCAAGAATGTTCAAGTTCCGATGCCTCTGATGATCCAGGGTGCAGCACAGATAATAGTGACGGGGAGGATACTTATATGGATAGTGCTCGTAGGTCAAAGAGGAAAAAGCAGAAGAGTGAAAATGAGATTATGACTTCTTCTGGGAGACGTGTGAAAAGGAGGAATTTGGATGAGTGTGATGGCAACAATTTCAGCAGTGGTCGAAGTAGGAAGGGAAAAGTTGGCCAAAAAACCTCAAGGAGGAGATCTAAATCAAAATCCTCCAGACCTCAAAGAGCTGCTGCACGCAATGCTCTAGATTTATTTTCAAAAATTACTGGTACGCCAACAGATGGAGAGGAAGATAGTTTGGTTGGTGATTTTTCAGATAGTGAATCAACATTGCCAGAGTCTAATATTGACAGTGATGAATCTGATAGAGCTTTACATGTTGACCAACTGAATAATTCAAAGGGAAAAGAAGTTTTATATGAATCGGAGGACATGAACTCTCATGAGTTAACCGAGACTCCTATGAATGCAATGAACAGGAAGAAGTTGGTTTTCAAGTTGCCAATTCGTGATTCATCTAAACCTAGACATCTGTTTTGTGACCAGGCTGAGTTTGTTAGCTCATCATCGAAAACTGCTGAGGAAGTTAGTGATTTTAGTAAGAACAGATCAAGTTTTAAGGATCCAGGGTATTGTTCTGGCAGTGGAAGTTACCAAACAACTGAAAGATTTCATCAAGTAGAACTAGACCACACAGAAAAGTATGTTAACGTACTAGGGAAGATTAAATGGGGAGGGGTCAGGGCTCGTTCATCTAAACCTCCCAGAATGGGAGAAGCTATGCCATCTGATGCAGCAGATCCCAACTCTGTAAAATATCCTAACCATCTCGATGAAAAAGAAAATGTTAGTACTGGGCATGAAAAAGATGACAGAAACTTCTGTACATCAACCCCTCCATCAGAAATCCAAAAGGTTGACGATAAGGTAGATATTTTGACAGAAATCAATGACAATTGTGCTGGCACTACCATAGAGTCTTCTAATCCTTCTGAGAATGGAAAAGAGCTCACAGCTTCAAGCAATTGCAAGGATAAAGATGAATCATTAGTTTTTGCTTGCATGACTTATCAGGATACAGTTACTGCTTCCGTCAGCCATAGTGAGGCTGAGCCACTTACCGAACCAAATATTTGTTTTCCTTCTGTTTCAACAAAGCTAAGGTCTAAAAGGGGTTCAAGGGATCCTGAAAGTCCAGCCAAGCATGAAACAAAGTTTCCCATGCTTAAGAATAGTGCATTTATCAGTAATGCTAATAATAATTTGAACAAACAGTGTACGGATGTGGTTGAGGATGGCAGCAATACTAAAGTAATATCTAGTCCAGGAAAAAATGGATCTGAAGAAATAGATACTCAGTTTAGACAAAATAGTACCTCACATGATTCACTTGAGCCACCTCCACGTAGTGATAGACTGTTTAAAACTGTATATAAAAGAACAAGATCACATAGGACTGTGGCTAATTTAGGTGATGGTAGTAGTGGCCTGGGAGAATCCACTTCTAATGGGAGCAACAGTAATTGCAACACTGCAGTGGACTTCATTAATGGCACAAATGAGGCTGTTCATACTAATGGATCCTTGGAGGTTGAACCAACCACTTGTGACCCAAATGATGAGCAAAATAATCTCCAAGTGCAGCAAGGCCATGAATATTGTAAGGATAAAAGTCTGCGGAGTGTTTCTAAAAATCGAGGGCATCTCACAGAAGAGGGAAGGGGCTCTAGTTCAAAATTAAATGTCGGTTTGAGGTCCACTAGGAGCCGGAAGTCTAGTTATAATATTTGTGAAACTAGTCCTGTAAATAAAAGGAAATCTCTACAGTCAGCTAATAAAGGATCATGGTTGCTGTTATCAACACAAGAAGAAGGATGCAGATATATTCCACAACTGGGTGATGAAGTTGTATATTTAAGACAGGGGCATCAGGAGTATTTAGATTATAGCCGTAAAAGAGAATCAGGGCCTTGGATATCACTTAAGGGGCATGTAAGAGCTGTAGAATACTGTATAGTCGAAAGCATCGAGTACTCTCATGTTCCAGGGTCTGGTGATAGCTGCTGCAAAATGACCCTTCAGTTTGTAGACCCTGATTCAACTGTTGCAGGCAAATGTTTTAAATTGACTCTACCAGATTTGACTAGCTTCCCAGATTTTCTTGTTGAAAGAACTAGATTTGATGCTGCTATGCAAAGAAATTGGACACGCCGAGATAAATGCAAGGTTTGGTGGAAAAATGAGGATGATTCCTCTGGTAGTTGGTGGGATGGTCGAATTCTGAATGAAAAAGCCAAGTCTTCAGAATTTCCAGAGAGTCCATGGGAAAGGTACACTATTCAGTACAAGAGTGACCTTGCTGAAACGCAGTTACATAGTCCTTGGGAGCTTTTTGATGCTGATACTCAGTGGGAACAGCCTCACATCGATGATAATAGAAGACATAAACTGCTGTCTGCTCTCACCAAATTACAGGAGTCTGGCAACACAGTTCAGGATCGTTACGGGGTTCATGAATTGAAGAAAATTTCAAGTAAATCAACATTTACAAACAGGTTTCCTGTTCCTGTATCTATTGATCTGATAGAGTCAAGGTTGGAGAACAATTACTACCGTAGTTTTGAGGCACTGAAGCTTGATGTGAAAGTTCTACTGTCTAATGCCACCTCTTTTCTTGAAAAAGATGCAAAGCTGATAGCAAAAATCAAACACCTATCAGAATGGTTCACACGGACATTATCATCTTCATAG 5193 0.4181 MALQKYVPSGDAPNVKIKRLTFSRNVSEKPQLEMAIQNHDPDMDVDLREVYFLILQFLSAGPCRKTRVQLWNELLEHQLLPRRYHAWYSRSGVRSGDEDDDGLSLPLSYNMLVERYPHVEKDHLVKLLKQLLLNTASPSLGTSSGNAPNAADVPTLLGTGSFSLVCDDKDKMNGEVKRPSAHMRWPHLKANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNMKRLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASASNDCVIRVWRLPDGLPISVLRGHTGAVTAMAFSPRPSAAYQLLSSSDDGTCRIWDARYTQSTPRIFVPKPSDSVIGKSSGPSTSTLPQSHQIFCCAFNANGTVFVTGSSDNLARVWIACKLSVNDTDQPNHEIDVLSGHENDVNYVQFSGCGVPPRFSTAETWKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKGGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGIPVRIYETSRFKLVDGKFSADGTSIILSDDVGQLYTLSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIIPYRRNLQDLLCDSAMIPYPEPYQSEFQRRRLGALGLEWRPSSLRLAIGPDFSLDPDYHMLPLEDLDVLIEPLPEFINAMDWEPEIEVFSDDADSEYNVTEDSSSRGEQECSSSDASDDPGCSTDNSDGEDTYMDSARRSKRKKQKSENEIMTSSGRRVKRRNLDECDGNNFSSGRSRKGKVGQKTSRRRSKSKSSRPQRAAARNALDLFSKITGTPTDGEEDSLVGDFSDSESTLPESNIDSDESDRALHVDQLNNSKGKEVLYESEDMNSHELTETPMNAMNRKKLVFKLPIRDSSKPRHLFCDQAEFVSSSSKTAEEVSDFSKNRSSFKDPGYCSGSGSYQTTERFHQVELDHTEKYVNVLGKIKWGGVRARSSKPPRMGEAMPSDAADPNSVKYPNHLDEKENVSTGHEKDDRNFCTSTPPSEIQKVDDKVDILTEINDNCAGTTIESSNPSENGKELTASSNCKDKDESLVFACMTYQDTVTASVSHSEAEPLTEPNICFPSVSTKLRSKRGSRDPESPAKHETKFPMLKNSAFISNANNNLNKQCTDVVEDGSNTKVISSPGKNGSEEIDTQFRQNSTSHDSLEPPPRSDRLFKTVYKRTRSHRTVANLGDGSSGLGESTSNGSNSNCNTAVDFINGTNEAVHTNGSLEVEPTTCDPNDEQNNLQVQQGHEYCKDKSLRSVSKNRGHLTEEGRGSSSKLNVGLRSTRSRKSSYNICETSPVNKRKSLQSANKGSWLLLSTQEEGCRYIPQLGDEVVYLRQGHQEYLDYSRKRESGPWISLKGHVRAVEYCIVESIEYSHVPGSGDSCCKMTLQFVDPDSTVAGKCFKLTLPDLTSFPDFLVERTRFDAAMQRNWTRRDKCKVWWKNEDDSSGSWWDGRILNEKAKSSEFPESPWERYTIQYKSDLAETQLHSPWELFDADTQWEQPHIDDNRRHKLLSALTKLQESGNTVQDRYGVHELKKISSKSTFTNRFPVPVSIDLIESRLENNYYRSFEALKLDVKVLLSNATSFLEKDAKLIAKIKHLSEWFTRTLSSS* 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0205 1730 CDD WD40 237 609 - -
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 610 IPR001680 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1087 1109 - -
Lan16g0205 1730 PANTHER WD REPEAT DOMAIN 9 23 1028 - -
Lan16g0205 1730 PANTHER WD REPEAT DOMAIN 9 1313 1728 - -
Lan16g0205 1730 ProSiteProfiles Bromodomain profile. 1670 1713 IPR001487 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1367 1387 - -
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1062 1115 - -
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 320 IPR001680 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1135 1152 - -
Lan16g0205 1730 Gene3D - 215 383 IPR015943 GO:0005515
Lan16g0205 1730 SMART WD40_4 569 609 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 230 269 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 430 495 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 314 356 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 380 418 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 272 311 IPR001680 GO:0005515
Lan16g0205 1730 SMART WD40_4 528 566 IPR001680 GO:0005515
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 278 IPR001680 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1365 1398 - -
Lan16g0205 1730 MobiDBLite consensus disorder prediction 780 935 - -
Lan16g0205 1730 MobiDBLite consensus disorder prediction 789 819 - -
Lan16g0205 1730 SUPERFAMILY WD40 repeat-like 229 649 IPR036322 GO:0005515
Lan16g0205 1730 Gene3D - 531 665 IPR015943 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1247 1285 - -
Lan16g0205 1730 CDD Bromo_WDR9_I_like 1601 1730 - -
Lan16g0205 1730 Pfam Bromodomain 1668 1716 IPR001487 GO:0005515
Lan16g0205 1730 Gene3D - 1667 1730 IPR036427 GO:0005515
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 356 - -
Lan16g0205 1730 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 23 1028 - -
Lan16g0205 1730 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 1313 1728 - -
Lan16g0205 1730 ProSitePatterns Trp-Asp (WD) repeats signature. 596 610 IPR019775 -
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 312 - -
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1135 1154 - -
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 237 272 - -
Lan16g0205 1730 MobiDBLite consensus disorder prediction 820 856 - -
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats profile. 386 417 IPR001680 GO:0005515
Lan16g0205 1730 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 365 IPR001680 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 870 886 - -
Lan16g0205 1730 Gene3D - 387 521 IPR015943 GO:0005515
Lan16g0205 1730 SUPERFAMILY Bromodomain 1665 1727 IPR036427 GO:0005515
Lan16g0205 1730 Pfam WD domain, G-beta repeat 232 269 IPR001680 GO:0005515
Lan16g0205 1730 Pfam WD domain, G-beta repeat 570 609 IPR001680 GO:0005515
Lan16g0205 1730 Pfam WD domain, G-beta repeat 390 417 IPR001680 GO:0005515
Lan16g0205 1730 Pfam WD domain, G-beta repeat 317 356 IPR001680 GO:0005515
Lan16g0205 1730 Pfam WD domain, G-beta repeat 275 310 IPR001680 GO:0005515
Lan16g0205 1730 MobiDBLite consensus disorder prediction 1247 1278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0205 Lan-Chr16 1608533 1625952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0205 229 417 Miscellaneous Gene Families AT5G08390 22.632 4.78e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0205 K11797 - gmx:100818665 2716.41