Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0200 ATGAACCCAACATTGGTTTTTATTCTAAGTATTGCAGCAATATTAGTGAGTATTGTGCATGCACAATCATCAGTGAAACCATTAGTAAAGATAGTGAAGGGTAAGAAGCTATGTGACAAAGGGTGGGAATGTAAGGGATTCTCTAGTTATTGTTGCAATGAGGCTATTTCTGAGTACTTTGATACTTATCAGTTTGAGAATTTGTTCTCAAAGCGTAATGCACCAGTTGCACATGCTAATGGATTCTGGGACTATCATTCTTTTATCACTGCTGCAGCACAATATCAACCTCATGGGTTTGGCACCACTGGAAACAAAACCACTGGGATGAAAGAGGTTGCTGCATTTCTTGGTCATGTTGGTAGCAAGACTTCTTGTGGTTATGGGGTAGCTACTGGGGGACCCCTTGCGTGGGGCTTATGCTACAATAAGGAATTGAGTCCTGATAAATACTACTGTGATGATTATTACAAATTAACCTATCCATGTTCTCCTGGTGCAGCATACTATGGCCGTGGTGCCATACCAATATACTGGAACTACAATTATGGAAAAACTGGTGAAGCCTTAAAAGTGGATCTATTAAACCATCCAGAATACATAGAACAAAATGCCACCTTAGCTTTTCAAGCAGCAATATGGAAATGGATGACCCCACCAGAGAAGCACATACCTTCAGCACATGATGTCTTTGTTGGAAACTGGAAACCAACAAAAAATGACACATTATCTAAAAGGGTCCCTGGATTTGGTGCCACTATTAATGTACTCTATGGTGATCAAGTATGTGGCCAAGGATCTGATAATGAAGCTATGAACAACATAATTTCTCACTATCTCTATTACCTTGATCTTATGGGAGTTGGAAGAGAAGAAGCTGGGCCTAATGAAGTGCTTTCATGTGCTCAACATGCTGCTTTTAAGCCTTCTGCCACACAATCTTCTTCAACAACTTGA 957 0.4013 MNPTLVFILSIAAILVSIVHAQSSVKPLVKIVKGKKLCDKGWECKGFSSYCCNEAISEYFDTYQFENLFSKRNAPVAHANGFWDYHSFITAAAQYQPHGFGTTGNKTTGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKYYCDDYYKLTYPCSPGAAYYGRGAIPIYWNYNYGKTGEALKVDLLNHPEYIEQNATLAFQAAIWKWMTPPEKHIPSAHDVFVGNWKPTKNDTLSKRVPGFGATINVLYGDQVCGQGSDNEAMNNIISHYLYYLDLMGVGREEAGPNEVLSCAQHAAFKPSATQSSSTT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0200 318 PANTHER CHITINASE-RELATED 8 310 - -
Lan16g0200 318 PANTHER - 8 310 - -
Lan16g0200 318 SUPERFAMILY Lysozyme-like 56 306 IPR023346 -
Lan16g0200 318 CDD chitinase_GH19 64 301 - -
Lan16g0200 318 Gene3D Endochitinase, domain 2 144 203 - -
Lan16g0200 318 Gene3D - 64 307 - -
Lan16g0200 318 Pfam Chitinase class I 64 291 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan16g0200 318 PIRSF Endochitinase 1 308 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0200 Lan-Chr16 1567621 1570060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0200 21 307 Glycoside Hydrolase AT3G16920 81.185 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0200 - - gmx:100809617 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0635 4 8698593 8700642 Lan16g0200 16 1567621 1570060 LSH