Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1272 ATGGGAATTGAGAATGAGAGAATGGATGAAATGAAAATGGAGATGGAGATGGAGAATAAGAACAAGGCAAGACTACGGGGATGGTTCGAGCGAGTTGACTCAGACAAGACAGGAAGCATAACAGCGCTCCAACTCAAGAGAGCTCTAGCAGTGGGGAACCTCGAATTTCCTCTCTCAGTTGTTCAGCAGATGATCAGGATGTATGACTTTGACAGGAATGGTACTATGAGCTTTGAAGAATTTCTTGCTCTCAACAACTTCCTTCTTAAGCTTCAACATACATTTTCTGATTTAGAGAGGTATTATACCTTCTCTTCTTTTTATTTACTTCTGCAGGCTCCATTAAGATTGATTGTGCAGTTTCATGACAGACAATAA 378 0.4048 MGIENERMDEMKMEMEMENKNKARLRGWFERVDSDKTGSITALQLKRALAVGNLEFPLSVVQQMIRMYDFDRNGTMSFEEFLALNNFLLKLQHTFSDLERYYTFSSFYLLLQAPLRLIVQFHDRQ* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1272 125 ProSiteProfiles EF-hand calcium-binding domain profile. 56 91 IPR002048 GO:0005509
Lan15g1272 125 PANTHER PEFLIN 12 100 - -
Lan15g1272 125 SUPERFAMILY EF-hand 13 97 IPR011992 -
Lan15g1272 125 ProSitePatterns EF-hand calcium-binding domain. 69 81 IPR018247 -
Lan15g1272 125 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Lan15g1272 125 PANTHER PEFLIN 12 100 - -
Lan15g1272 125 Gene3D - 4 113 - -
Lan15g1272 125 SMART efh_1 24 52 IPR002048 GO:0005509
Lan15g1272 125 SMART efh_1 60 88 IPR002048 GO:0005509
Lan15g1272 125 Pfam EF-hand domain pair 24 83 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1272 Lan-Chr15 20895761 20896478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1272 3 112 EF-hand Containing Proteins AT5G12180 26.562 6.62e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1272 - - lang:109328412 216.853