Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1269 ATGAAGATGAGGGTTATAGTGTTATTAAGTGTGTTAATATCAATAAGTGTTGAGAGCTGCTTGGGAGAACAATGTGGGAGACAAGCAGGGGGAGCTGTGTGCCCAGGTGGATTATGTTGCAGCCAGTTCGGATGGTGTGGTTCAACCATTGAATACTGTGGCACTGGTTGCCAAAGCCAATGCAGTGGTAGTGGTGGTGGTGGCGGTGATATTGGCAGTATAATCTCCAGGGACAACTTCAACCAGATACTTAAACACCGTGATGATGCAGCCTGCCCAGCCAAAGGGTTCTATACATATGATGCTTTCATTTCTGCTGCCAAGTCTTTTCCCAACTTTGCTTCCACTGGAGATACTACCACTCGCAAAAGGGAGATTGCAGCTTTCTTAGCTCAAACTTCCCACGAAACTACTGGGGGGTGGCCAAGTGCACCAGATGGCCCATATTCTTGGGGGTACTGCTTTGTTAGGGAAAGAAACCCAAGTGCTTATTGTGAGCCAAGCACTCAATTTCCTTGTGCTCCTGGCAAGCAATACTATGGTCGGGGTCCTATTCAAATCTCCTGGAACTACAACTATGGACAATGTGGAAAAGCAATAGGTGTGGACTTGTTGAACAACCCAGACCTTGTGGCGAGTGACCCACTGATCTCATTCAAGACAGCGATATGGTTCTGGATGACACCACAGTCACCAAAGCCATCATGCCACGATGTCATCACCGGACGATGGAACCCATCAGACAGTGATAGGGCAGCAGGACGGCTTCCTGGATACGGCACTGTCACCAATATCATCAATGGTGGCCTTGAATGTGGCATTGGGCAGGATAGCAGGGTGCAAGATCGTATCGGATTTTACAAGAGATATTGTGACTTGCTTGGCATTCCTTATGGCACTAACCTTGACTGTTCTTCCCAGAGGCCATTTGGCTCTGCACTGGACACAATGTAA 954 0.4801 MKMRVIVLLSVLISISVESCLGEQCGRQAGGAVCPGGLCCSQFGWCGSTIEYCGTGCQSQCSGSGGGGGDIGSIISRDNFNQILKHRDDAACPAKGFYTYDAFISAAKSFPNFASTGDTTTRKREIAAFLAQTSHETTGGWPSAPDGPYSWGYCFVRERNPSAYCEPSTQFPCAPGKQYYGRGPIQISWNYNYGQCGKAIGVDLLNNPDLVASDPLISFKTAIWFWMTPQSPKPSCHDVITGRWNPSDSDRAAGRLPGYGTVTNIINGGLECGIGQDSRVQDRIGFYKRYCDLLGIPYGTNLDCSSQRPFGSALDTM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1269 317 PRINTS Chitin-binding domain signature 32 40 IPR001002 GO:0008061
Lan15g1269 317 PRINTS Chitin-binding domain signature 40 47 IPR001002 GO:0008061
Lan15g1269 317 PRINTS Chitin-binding domain signature 47 54 IPR001002 GO:0008061
Lan15g1269 317 CDD chitinase_GH19 77 304 - -
Lan15g1269 317 Gene3D - 74 305 - -
Lan15g1269 317 Gene3D Endochitinase, domain 2 157 213 - -
Lan15g1269 317 SUPERFAMILY Lysozyme-like 70 311 IPR023346 -
Lan15g1269 317 Gene3D - 22 64 IPR036861 GO:0008061
Lan15g1269 317 SUPERFAMILY Plant lectins/antimicrobial peptides 24 63 IPR036861 GO:0008061
Lan15g1269 317 ProSiteProfiles Chitin-binding type-1 domain profile. 22 63 IPR001002 GO:0008061
Lan15g1269 317 ProSitePatterns Chitinases family 19 signature 1. 92 114 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan15g1269 317 Pfam Chitin recognition protein 24 61 IPR001002 GO:0008061
Lan15g1269 317 SMART ChitinBD_3 24 61 IPR001002 GO:0008061
Lan15g1269 317 PIRSF Endochitinase 1 311 IPR016283 GO:0004568|GO:0005975
Lan15g1269 317 Pfam Chitinase class I 74 304 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan15g1269 317 ProSitePatterns Chitinases family 19 signature 2. 217 227 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan15g1269 317 CDD ChtBD1_GH19_hevein 23 54 - -
Lan15g1269 317 PANTHER CHITINASE-RELATED 9 313 - -
Lan15g1269 317 PANTHER CHITINASE 2 9 313 - -
Lan15g1269 317 ProSitePatterns Chitin recognition or binding domain signature. 34 53 IPR018371 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1269 Lan-Chr15 20882415 20883705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1269 2 314 Glycoside Hydrolase AT3G12500 67.296 1.31e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1269 K20547 - jre:109019134 506.523