Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1264 ATGGTTGTTGCAGCTGCCATCAATGGAGTAGGTCTCACCACCACTACCACATCCTTAGGGTTTTCTAGAAGAGCAACAAGAACAACGACAACCTTTTCTCATTCTCCTTCAGTCACAATGACTGTATCCATCGACAGCAGCAAGAAGAATCTCACTCTCACCAAATCACAAGAAGCTTTCACCGCTGCTAAGGAATTGATGCCTGGAGGTGTAAACTCTCCAGTTAGAGCCTTTAAATCAGTGGGTGGACAACCCATTGTGATTGATTCAGTTAAAGGATCTCATATGACTGACATTGATGGCAATCACTACATTGACTACGTTGGTTCTTGGGGTCCTGCCATTATTGGTCATGCTGATGATCAGGTGCTTGCAGCTCTATCTGAGACAATGAGAAAAGGAACCAGCTTTGGTGCACCTTGTCTGCTCGAGAACTCTTTAGCCGAGGCCGTTATCTCTGCAGTACCAAGCATTGAAATGGTTCGATTTGTTAACTCCGGCACAGAAGCTTGTATGGCTGTGCTCCGCCTTGCTCGTGCTTTTACTGGAAATGAGAAGATCATCAAGTTTGAAGGCTGTTACCATGGCCATGCCGATCCTTTTCTTGTTAAGGCCGGTAGTGGTGTTGCCACCTTAGGACTTCCTGACTCCCCTGGCGTTCCTAAAGGTGCCACTTATGAAACCCTCACAGCCCCTTACAATGACTTCTCAGCTGTTGAGAAGCTCTTTGAGTCTAACAAAGGAGGGATAGCAGCAGTTATCATTGAACCAGTTGTTGGAAACTCTGGTTTCATTACTCCCAAACCTGATTTTCTCAGCTTCTTACGCAAAATCACCAAGGAGAACAACTCCCTTCTCATCTTTGATGAAGTTATGACTGGATTTCGTTTGTCATATGGAGGTGCTCAAGAATATTTTGGTATAACTCCTGATTTAACAACTCTAGGAAAAATCATTGGTGGGGGTCTGCCAGTAGGTGCTTATGGAGGGAGGAAGGATATTATGCAGTTGGTGGCCCCAGCTGGACCTATGTACCAGGGTGGAACCTTGAGCGGGAACCCTTTGGCCATGACTGCAGGAATACATACTTTGAAGCGTATTAAGGAGCCAGGAACCTACGAATACTTGGACAAAATTACAGGTGAGCTTGTTCAGGGCATCGTCAATGCTGGGAAGAGGGCGGGCCATGCAATATGTGGAGGGCATATAAGTGGAATGTTTGGGTTTTTCTTCACAGAAGGACCTGTTTACAACTTTGCAGATGCCAAAAAGAGTGATGCAGATAAGTTTGCTAGGTTCTTCTGGGGAATGTTAGCGGAAGGTGTGTATTTAGCACCTTCTCAGTTTGAGGCTGGGTTCACCAGCTTGGCACATACTTCGGATGATATCAAAAAGACAATAGCTGCTGCTGAGAAGGTTTTCAGGGAGATCTGA 1434 0.4568 MVVAAAINGVGLTTTTTSLGFSRRATRTTTTFSHSPSVTMTVSIDSSKKNLTLTKSQEAFTAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSHMTDIDGNHYIDYVGSWGPAIIGHADDQVLAALSETMRKGTSFGAPCLLENSLAEAVISAVPSIEMVRFVNSGTEACMAVLRLARAFTGNEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPYNDFSAVEKLFESNKGGIAAVIIEPVVGNSGFITPKPDFLSFLRKITKENNSLLIFDEVMTGFRLSYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRKDIMQLVAPAGPMYQGGTLSGNPLAMTAGIHTLKRIKEPGTYEYLDKITGELVQGIVNAGKRAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDADKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1264 477 Gene3D Aspartate Aminotransferase, domain 1 58 470 IPR015422 GO:0003824
Lan15g1264 477 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 20 475 - -
Lan15g1264 477 Coils Coil 463 477 - -
Lan15g1264 477 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 286 322 IPR005814 GO:0008483|GO:0030170
Lan15g1264 477 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 55 476 IPR004639 GO:0033014|GO:0042286
Lan15g1264 477 Gene3D - 121 369 IPR015421 GO:0003824
Lan15g1264 477 Pfam Aminotransferase class-III 85 394 IPR005814 GO:0008483|GO:0030170
Lan15g1264 477 PANTHER BNAA09G06670D PROTEIN 20 475 - -
Lan15g1264 477 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 55 477 IPR004639 GO:0033014|GO:0042286
Lan15g1264 477 SUPERFAMILY PLP-dependent transferases 53 476 IPR015424 -
Lan15g1264 477 CDD OAT_like 60 474 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1264 Lan-Chr15 20863719 20865607 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1264 K01845 - gmx:100790574 785.023