Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1262 ATGAGACTTCATAATGCTATGCTGGTTGTAACTCTTGTTCTTTGTATTGTTACCATTGCTTGTGCACAAGGGCGTGCACCTGCTGTGAGGCTTCATAAGCCTCATTCTGTGAGTGGTATTCAGAATGTGAGTTATGATGGCAGGTCTCTATTAATCAACGGCCAACGCCACCTTCTCTTTTCCGGTTCAATTCATTACACAAGAAGCACCCCTGAAATGTGGCCTGACCTTCTTGATAAGGCAAGACATGGTGGTTTGAATGTCATTCAAACATATGTCTTTTGGAATGCTCATGAGTCTGAGAAAGGCAAGTGGAACTTTGAAGGCAACTATGATCTTGTCAAGTTTATTAAGCTTATTCAACAGAAAGGAATGTTTGCAACCCTCAGAGTTGGCCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGGCATCATATTCCGCTCTAACAATGAGCCATTTAAGCAACACATGGAAGCATACGTGACAAAGATCATAAAAATGATGAAAGATGAGAAGCTGTTTGCATCCCAAGGAGGGCCAATAATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGACGAAGATGGTCCCAGTTATGTCCAATGGGCTGCAAATATGGCAGTGGCACAAAACATTGGAGTTCCATGGATCATGTGCAAGCAGAAGGATGCACCTGATCCAGTTATCAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCACTGGCCCAAACAAACCATACAAGCCTGCCCTATGGACTGAGAACTGGACAGCTCAGTACAGAGTTTTCGGTGATCCTACTTCCCAAAGATCTGCTGAAGATATTGCCTTCTCAATTGCCCGCTTCTTCTCCAAGGATGGCATCTTGGTCAACTACTATATGTACCATGGTGGAACAAACTTCGGAAGGACAAGCGCTGCATTCACCACAACCCGGTACTACGATGAAGCACCACTTGATGAATTTGGTCTTCAAAGAGAACCAAAATGGAGTCACTTGAGGGATGCACACAGGTCTTTGAACCTATGCAAGAAGGCTCTACTCACCGGAAAATCCAGTGTACAAAGGCTGAACGAGTTTCATGAGATTAGAGTGTATGAGAAACCCCAAAGTGACATTTGTTCAGCATTCATCACTAACAACCACACAAATGAAGCAGCCACCATTAACTTCAGAGGTAAAAACTTCTTTCTGCCACCACATTCCATCAGTGTCCTCCCTGATTGCAAGACTGTGGTCTACAACACTCAACAGATAGCTTCACAACATAATACAAGGAACTTCAGGAGGTCAACTCTTGCAAACAATCACAAATGGGAGGTGTTTTCTGAGACCATCCCATCACTTCCGGTCACCCAAAAACTCCCTGCTGAGCTTTATAGCTTGCTTAAAGACACCACGGATTATGCATGGTACAGCACCAGCTTCAACTTGGGTGCTCAAGACTTGCCAAAGAATGGTGCAGCACCAGTTCTTCGTATTATGAGTCTTGGACATTCATTGCTTACATTTGTAAATGGAGAATATATTGGATCTAATCATGGAACACATGAAGAGAAATCATTTGAATTCCAGAAACCTGTAAACTTCAAGGTTGGGAACAACCGTATTACAATCTTGGCTAGCACAGTTGGACTACCAGACAGTGGAGCATACATGGAACACAGGTACGCGGGACCCAAGTCCATAAGCATCCTTGGTCTCACTACAGGAACAATTGAACTCACAGCCAATGGTTGGGGTCACAAGGTTGGTCTGAAAGGTGAAAAGCAAAAAATCTTCAGTGAGGAGGGATCAAAGAGAGTAAAGTGGAGAGTTGCTGTTGGAAATGCACCAGCTTTGTCATGGTTCAAGACAAGATTTAGTACCCCAGAGGGAAGGGATCCTATTGCTGTAAGGATGAACGGGATGGGGAAGGGAATGATTTGGGTGAATGGAAAAAGCATAGGTCGTCACTGGATGAGTTTCCTGTCCCCCATTGGAAAGCCTACTCAGTCAGAATACCACATCCCAAGAGCATTCCTGAACCCATCAAAAGAAGAAAACTTGCTTGTTGTATTGGAAGAGGAGATTGCAAATCCAGGACAAATTGAGATTGTAACTGTTGACAGAGATGTTGTGTGCAGCTTCATCACAGAGAACCATCCACCAAATGTGAATTCATTTGCATCCAAGGACATGAAAGTCCATTCTGTTATAGAACCTGAGAAACCAGCTGCAATACTCAAGTGTTCCAACTTCAAGAAGGTTGTGGCAGTTGAGTTTGCAAGCTATGGAAACCCATCAGGTTTCTGTGGAAGCTTTGCTTTAGGGAACTGCAACGTGGCTGCTGCAAAGAACATCGTCGAGCAAGAATGCTTGGGGAAGAAGTCATGCAAGGTTTCAATGGAAAGCTTTAGCAAGAATGGGAATGTATGCCCAGGTTTGGAGAAGACACTAGCAATACAAGTGAGGTGTTCTCATTAG 2514 0.4391 MRLHNAMLVVTLVLCIVTIACAQGRAPAVRLHKPHSVSGIQNVSYDGRSLLINGQRHLLFSGSIHYTRSTPEMWPDLLDKARHGGLNVIQTYVFWNAHESEKGKWNFEGNYDLVKFIKLIQQKGMFATLRVGPFIQAEWNHGGLPYWLREVPGIIFRSNNEPFKQHMEAYVTKIIKMMKDEKLFASQGGPIILAQIENEYNHIQLAYDEDGPSYVQWAANMAVAQNIGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPALWTENWTAQYRVFGDPTSQRSAEDIAFSIARFFSKDGILVNYYMYHGGTNFGRTSAAFTTTRYYDEAPLDEFGLQREPKWSHLRDAHRSLNLCKKALLTGKSSVQRLNEFHEIRVYEKPQSDICSAFITNNHTNEAATINFRGKNFFLPPHSISVLPDCKTVVYNTQQIASQHNTRNFRRSTLANNHKWEVFSETIPSLPVTQKLPAELYSLLKDTTDYAWYSTSFNLGAQDLPKNGAAPVLRIMSLGHSLLTFVNGEYIGSNHGTHEEKSFEFQKPVNFKVGNNRITILASTVGLPDSGAYMEHRYAGPKSISILGLTTGTIELTANGWGHKVGLKGEKQKIFSEEGSKRVKWRVAVGNAPALSWFKTRFSTPEGRDPIAVRMNGMGKGMIWVNGKSIGRHWMSFLSPIGKPTQSEYHIPRAFLNPSKEENLLVVLEEEIANPGQIEIVTVDRDVVCSFITENHPPNVNSFASKDMKVHSVIEPEKPAAILKCSNFKKVVAVEFASYGNPSGFCGSFALGNCNVAAAKNIVEQECLGKKSCKVSMESFSKNGNVCPGLEKTLAIQVRCSH* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1262 837 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
Lan15g1262 837 Gene3D - 364 575 - -
Lan15g1262 837 SUPERFAMILY (Trans)glycosidases 42 359 IPR017853 -
Lan15g1262 837 Pfam Galactose binding lectin domain 758 835 IPR000922 GO:0030246
Lan15g1262 837 ProSiteProfiles SUEL-type lectin domain profile. 750 836 IPR000922 GO:0030246
Lan15g1262 837 SUPERFAMILY Galactose-binding domain-like 593 741 IPR008979 -
Lan15g1262 837 Pfam Glycosyl hydrolases family 35 49 354 IPR031330 -
Lan15g1262 837 Gene3D - 740 837 IPR043159 -
Lan15g1262 837 Pfam Beta-sandwich domain in beta galactosidase 363 435 IPR041392 -
Lan15g1262 837 PANTHER BETA-GALACTOSIDASE RELATED 31 833 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 SUPERFAMILY Galactose-binding domain-like 419 575 IPR008979 -
Lan15g1262 837 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 31 833 - -
Lan15g1262 837 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lan15g1262 837 Gene3D - 600 726 - -
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 628 642 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 PRINTS Glycosyl hydrolase family 35 signature 655 671 IPR001944 GO:0004553|GO:0005975
Lan15g1262 837 Gene3D Glycosidases 40 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1262 Lan-Chr15 20854894 20858767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1262 43 835 Glycoside Hydrolase AT2G16730 60.050 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1262 - - gmx:100791456 1228