Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1226 ATGGCGCTCAAGTTAACGGGAGGAGCCACTTTTGGCTCATTGCTCCTATGTGTTGTTTCTATTTCTCTCTTTCACATTACTTGCGCTGAAGATCCCTATAGATTCTTCAACTGGAACGTTACTTATGGTGACATTTACCCACTCGGAGTTCGCCAAAGGGGAATACTTATAAATGGACAGTTCCCAGGTCCAGATATTCATTCGGTTACAAATGACAATCTCATTATCAATGTCTTCAATAGCTTGGATGAACCTTTTCTTCTTTCATGGAACGGGATACAACAAAGAAGGAACTCATTCGAAGATGGAGTATCTGGAACAACATGCCCCATCCCACCAGGGAAGAATTTCACATACATTCTTCAAGTTAAGGATCAGATTGGAAGTTTTTATTACTTTCCATCACTTGGATTTCACAAAGCTGCTGGTGGTTTTGGTGGCATTAGGATCCTCAGTAGACCAAGAATTCCAGTACCTTTCCCTGATCCTGCTGGTGATTATACTATTCTTATTGGAGATTGGTACAAATCCAACCACACTACATTGAAAGCCCATCTTGACCAGGGCAAGAAGCTACCCATCCCTGATGGAGTCCTCATCAATGGTCGTGGACCTAATGGAGTATCTTTCAACGTGGAACAAGGTAAGACTTACAGGCTTAGAATATCAAATATTGGGTTGGAACATTCCCTTAACTTTCGCATCCAGAACCACAAATTGAAGCTAGTAGAAGTAGAAGGAACACATACCCTTCAAACTACGTACTCCTCTCTAGATGTTCATGTGGGACAATCTTATTCAGTTCTAGTAACTGCTGATCAACCTGCCCAGGATTATTACATTGTGGCTTCCACTCGATTCACCTCTAAGGTCATTACCACTACTGGTGTTCTTCGCTATAGCAATTCTGCAGGCCCAGTATCAGGCCCACCCCCTGGTGGACCAACAATCCAAATTGACTGGTCTTTGAACCAGGCCCGATCCATCAGGACTAACCTTACAGCAAGTGGACCAAGACCAAACCCACAAGGATCCTACCATTACGGTCTTATAAACACGACCAAAACAATCATACTTTCCAGTTCAGCTGGTCAAGTAAATGGGAAACAAAGATATGCAATTAACAGTGTGTCTTATGTTGTTCCGGACACTCCTCTTAAACTCGCAGACTACTTCAAAATCTCCGATGTCTTCCGCGTTGGAAGCATATCAGACAGACCTACCGGTGGCGGCATTTATATTGACACTTCTGTATTGCAAGCTGATTACAGATCCTTTGTTGAGATTGTCTTCCAAAATGATGAAGTCATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGCATGGATGGAGGGCAATGGACACCGGCTAGCCGGAAACAGTACAATCTTCGAGATGCAGTTTCACGTTGCACCACTCAGGTATATCCTAAGTCATGGACTGCTATTTATGTTGCACTAGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATATCTTGGACAACAGTTTTATTTGCGTGTTTATACAACATCAACTTCAATCAGAGATGAGTTTCCAATTCCAAAGAATGCACGTCTATGTGGTAAGGCAAGTGGGAGACACACACGACCCCTTTGA 1647 0.4299 MALKLTGGATFGSLLLCVVSISLFHITCAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVSGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLGFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTILIGDWYKSNHTTLKAHLDQGKKLPIPDGVLINGRGPNGVSFNVEQGKTYRLRISNIGLEHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVASTRFTSKVITTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILSSSAGQVNGKQRYAINSVSYVVPDTPLKLADYFKISDVFRVGSISDRPTGGGIYIDTSVLQADYRSFVEIVFQNDEVIVQSYHLDGYSFFVVGMDGGQWTPASRKQYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTTSTSIRDEFPIPKNARLCGKASGRHTRPL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1226 548 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Lan15g1226 548 Gene3D - 349 544 IPR008972 -
Lan15g1226 548 SUPERFAMILY Cupredoxins 160 340 IPR008972 -
Lan15g1226 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Lan15g1226 548 PANTHER MULTI-COPPER OXIDASE 11 541 IPR045087 -
Lan15g1226 548 CDD CuRO_1_AAO_like_1 35 150 IPR034273 GO:0005507
Lan15g1226 548 SUPERFAMILY Cupredoxins 28 180 IPR008972 -
Lan15g1226 548 Gene3D - 164 339 IPR008972 -
Lan15g1226 548 Pfam Multicopper oxidase 166 302 IPR001117 -
Lan15g1226 548 CDD CuRO_3_AAO_like_1 382 502 IPR034275 GO:0005507
Lan15g1226 548 Pfam Multicopper oxidase 384 520 IPR011706 GO:0005507|GO:0016491
Lan15g1226 548 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 11 541 - -
Lan15g1226 548 Gene3D - 33 154 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1226 Lan-Chr15 20631456 20637359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1226 - - gmx:100815570 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1226 15 20631456 20637359 Lan14g0962 14 15975925 15981442 LSH