Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1119 ATGAAGGGAACAAACACTGAAGATGATAACATCATAATAAACCCAGAGTTTGAGAATGGCCTAAGTAATTGGTCAGGAAGAGGGTGCAAAATTGTATTACATGATTCCATTGGAGATGGCAAAATCCTTCCAAAGACTGGCAAGTTCTTTGCATCTGCAACAGAACGTACACAAAACTGGAATGGAATTCAGCAAGAGATCACGGCACGAGTGCAGCGCAAACTGGCCTATGAGGTCACTGCTTTAGTTCGGATATTTGGTAACAATGTCACCACTTCTGATGTAAGAGCTACTTTGTATGTTCAAACACCAGATTTTCGAGAGCAGTACATAGGCATTGCCAATGTGCAGGCAACAGATAAAGATTGGGCTCAAATGCAAGGGAAGTTCCTTCTAAATGGTTCCCCATCAAAAGTGTTTGTTTATTTGGAAGGTCCCCCTTCAGGCACTGACATTCTTCTCAATACTTTGGTTATAAAGCATGCTCCTAAAACACCTCCTTCTACACCCCAGGATTTTGAGGATGCTGCTTTTGGGATCAATATAATAGAGAACAGTGATCTGGCTAAGGGCACCAATGGATGGTTCCCACTTGGTAATTGTACATTGAGTGTTGGAACTGGTTCACCACGCATAATTCCACCAATGGCAAGAGACTCTCTTGGGCCTCATGAATCCTTAAGTGGGCATTACATACTTGTAACCAATCGTACACAAACATGGATGGGTCCAGCTCAGATGATCACAGAGAAATTGAAACTGTTTCTTACTTACCAAGTATCTGCTTGGGTCAGAATTGGTTCAGGATCCAGTGGGCCTCAGAATGTGAATATTGCACTAAGTGTTGATGACCAATGGGTCAATGGAGGACAAGTTGAGGTTGCTGATGGAAAATGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAAGTGCCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTATTGACTTAATGATTGCTGGACTTCAAATTTTCCCTGTTGATAGACATGCAAGGTTTAGATATTTAAGGAGGCAAACAGACAAGATCCGCAAGCGTGACATAATCCTGAAATTCTCTGGGCTGGACTCAAGCGAGTGTCTTAGAGCTATGGTGAAAGTTACACAAATCCAAAACGATTTTCCAATTGGATCATGCATCAATAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTTTGAATCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAATGGTATTGGACTGAAGCACAAAAAGGGAATTTCAATTACAAGGATGCAGATGATATGTTAGATTTATGTCAGAAGAACAACATAAACACACGTGGTCATTGTATCTTCTGGGAAGTGGATGGCACTGTTCAACAATGGATTAAATCACTTAATAAAAGTGATTTAATGACAGCTGTCCAAAATAGATTAACTGGTTTGCTTACTCGATATAAGAGCAAGTTCAAGCACTATGATGTTAATAATGAAATGTTGCATGGTTCATTTTATCAAGATAAACTAGGTAAGGATATAAGGGCTAATATGTTCAAGACAGCACATCAATTAGATTCATCTGCTACCCTTTTTGTGAATGATTATCATGTTGAAGATGGATGTGACACTAGATCATCTCCTGAAAAATATATTCAACAAATTATTGATTTGCAAGGTCAAGGTGCTCCTGTGGGTGGAATTGGAATTCAGGGTCATATAGATAGCCCTGTGGGGCCTATAGTATGTTCTGCTCTTGATAAATTAGGCACTCTTGGTTTACCAATATGGTTTACTGAACTTGATGTGTCTTCTACTAATGAATATGTTAGAGCAGATGATCTTGAAGTTATGCTGAGGGAAGCTATGGCACACCCTTCAATAGAGGGTATAATGCTATGGGGTTTTTGGGAATTGTTTATGAGCAGGGACAATTCACACTTGGTGAATGCAGAAGGTAGTATCAATGAAGCTGGGAAAAGATTCCTTGCTCTTAAAAAAGAGTGGCTATCTCATTCACATGGTCTTGTTGATGAGCAAGGGTACTTCACTTTCAGAGGTTTTAATGGAAAGTACAATGTGGAAGTTGTGACCTTAACTAAGGAAATTTCTAAGACATTTGTTGTTGTTGACAATGGTGACTCTCCACTTGTGGTATCAATCGATTTATGA 2178 0.393 MKGTNTEDDNIIINPEFENGLSNWSGRGCKIVLHDSIGDGKILPKTGKFFASATERTQNWNGIQQEITARVQRKLAYEVTALVRIFGNNVTTSDVRATLYVQTPDFREQYIGIANVQATDKDWAQMQGKFLLNGSPSKVFVYLEGPPSGTDILLNTLVIKHAPKTPPSTPQDFEDAAFGINIIENSDLAKGTNGWFPLGNCTLSVGTGSPRIIPPMARDSLGPHESLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSGSSGPQNVNIALSVDDQWVNGGQVEVADGKWHEIGGSFRIEKVPSKVMVYIQGPASGIDLMIAGLQIFPVDRHARFRYLRRQTDKIRKRDIILKFSGLDSSECLRAMVKVTQIQNDFPIGSCINRTNIDNEDFVDFFLNHFNWAVFGNELKWYWTEAQKGNFNYKDADDMLDLCQKNNINTRGHCIFWEVDGTVQQWIKSLNKSDLMTAVQNRLTGLLTRYKSKFKHYDVNNEMLHGSFYQDKLGKDIRANMFKTAHQLDSSATLFVNDYHVEDGCDTRSSPEKYIQQIIDLQGQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSTNEYVRADDLEVMLREAMAHPSIEGIMLWGFWELFMSRDNSHLVNAEGSINEAGKRFLALKKEWLSHSHGLVDEQGYFTFRGFNGKYNVEVVTLTKEISKTFVVVDNGDSPLVVSIDL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1119 725 PRINTS Glycosyl hydrolase family 10 signature 449 461 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 PRINTS Glycosyl hydrolase family 10 signature 531 542 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 PRINTS Glycosyl hydrolase family 10 signature 563 575 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 Gene3D - 4 161 - -
Lan15g1119 725 Gene3D - 175 336 - -
Lan15g1119 725 SUPERFAMILY Galactose-binding domain-like 179 339 IPR008979 -
Lan15g1119 725 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 595 605 IPR031158 -
Lan15g1119 725 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 372 667 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 Pfam Glycosyl hydrolase family 10 380 638 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 Gene3D Glycosidases 370 677 - -
Lan15g1119 725 SUPERFAMILY Galactose-binding domain-like 8 164 IPR008979 -
Lan15g1119 725 SMART glyco_10 418 668 IPR001000 GO:0004553|GO:0005975
Lan15g1119 725 PANTHER GLYCOSYL HYDROLASE 4 725 IPR044846 GO:0004553|GO:0005975
Lan15g1119 725 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 4 725 - -
Lan15g1119 725 Pfam Carbohydrate binding domain 9 147 IPR003305 GO:0016798
Lan15g1119 725 Pfam Carbohydrate binding domain 181 324 IPR003305 GO:0016798
Lan15g1119 725 SUPERFAMILY (Trans)glycosidases 376 675 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1119 Lan-Chr15 20001953 20005592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1119 1 725 Glycoside Hydrolase AT1G58370 72.902 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1119 - - gmx:100784250 1305.04