Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1112 ATGTCTAACCCATCTTCCAAACCCAACGGAAACGGAACAATTAACGGTAACGGCGCCGTACCTGCCACCGTCAATGGCAACCCCGGTGGAGTTAAATCCCAGCTTTACAACCCAAACCGTCAAATCTACCGTCCTCAATCCCACCACCACCGCCGCCACCGCTCCAACCGCAACCTCTGCTGTTGCTGCTGCTTCTGGACAATTCTCACCCTCCTCGCCGTCGCACTCCTCGCTGCCATCGTCGGCGCCGCACTCTACGTCCTCTACCGCCCTAACCGACCCGAATTCTCCGTCACAAACCTCCGCATTGCGAAAATGAACCTAACCACCTCATCAGACTCACCTTCACACCTCACCACACTCTTCAACCTCACCCTCATAGCGAAAAACCCTAACAACCACCTCATATTCTTCTACGAGCCATTCACTGTAACAGTTTTCTCTAACTCCGTAGCAATCGGGAACGGGACGTTACCATCGTTTGAATCTGGTAAGAATAACCAAACGAGTGTGAAGAGCATTGTTTCAGGGTCAATGGATCTGGACACAGAATCGTTGAATAGTTTAAGATCGGGGTTGAAGAAGGTGAAGGGTTTTCCAGTAGAAATTCAAATGGATACAAAGGTGAAGATGAAGATGGAATCATTGAAGAGTAAGAAGGTTGGGATTAGAGTCACGTGTGAAGGAATAAGAGGAAACGTGCCAAGTGCTAAGTCTCCAACAGTGGCTTCAGTTATCAACTCTCAGTGTAAGGTTGATCTCAGAATCAAGATCTGGAAATTTTCCTTTTAG 792 0.4836 MSNPSSKPNGNGTINGNGAVPATVNGNPGGVKSQLYNPNRQIYRPQSHHHRRHRSNRNLCCCCCFWTILTLLAVALLAAIVGAALYVLYRPNRPEFSVTNLRIAKMNLTTSSDSPSHLTTLFNLTLIAKNPNNHLIFFYEPFTVTVFSNSVAIGNGTLPSFESGKNNQTSVKSIVSGSMDLDTESLNSLRSGLKKVKGFPVEIQMDTKVKMKMESLKSKKVGIRVTCEGIRGNVPSAKSPTVASVINSQCKVDLRIKIWKFSF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1112 263 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 262 - -
Lan15g1112 263 SUPERFAMILY LEA14-like 75 171 - -
Lan15g1112 263 PANTHER HARPIN-INDUCED PROTEIN 5 262 - -
Lan15g1112 263 Pfam Late embryogenesis abundant protein 128 227 IPR004864 -
Lan15g1112 263 MobiDBLite consensus disorder prediction 1 31 - -
Lan15g1112 263 Gene3D - 88 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1112 Lan-Chr15 19964991 19966306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1112 38 228 EF-hand Containing Proteins AT5G21130 30.000 1.13e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1112 - - lang:109328718 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1112 15 19964991 19966306 Lan3g1151 3 23796407 23797644 LSH