Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1099 ATGGATTTCAGGTTGATGGGTTTGGATTCACCATTCTTAAACACGCTGCACCAAATAATGGACCTCACAGACAACAACATTGATAAGAATCTGAATGCACCAAGCAGAACATATGTAAGGGACGCAAAGGCAATGGCTGCAACTCCAGCAGACGTGAAGGAATACCCGAAATCATACATGTTCGTGATCGACATGCCAGGGTTGAAGTCTGGGGACATAAAGGTTCAGGTGGAAGATGAGAATGTTCTTCTTATAAGCGGTGAGAGGAAGAGAGAGGAAGAGAAAGAAGGGTCTAAGTATCTGAGAATGGAAAGAAGAGTTGGTAAATTTATGCGTAAATTTGTTCTACCTGAGAATGCTAACACTGATTCTATTTCTGCTGTTTGCCAAGATGGTGTTCTTACTGTTACTGTTCATAAGTTGCCTCCTCCTGAACCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 474 0.4177 MDFRLMGLDSPFLNTLHQIMDLTDNNIDKNLNAPSRTYVRDAKAMAATPADVKEYPKSYMFVIDMPGLKSGDIKVQVEDENVLLISGERKREEEKEGSKYLRMERRVGKFMRKFVLPENANTDSISAVCQDGVLTVTVHKLPPPEPKKPKTIEVKIA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1099 157 SUPERFAMILY HSP20-like chaperones 25 149 IPR008978 -
Lan15g1099 157 Gene3D - 7 156 IPR008978 -
Lan15g1099 157 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 156 - -
Lan15g1099 157 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 157 IPR002068 -
Lan15g1099 157 Pfam Hsp20/alpha crystallin family 51 155 IPR002068 -
Lan15g1099 157 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 9 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1099 Lan-Chr15 19897197 19897915 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1099 K13993 - pop:7462237 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1099 15 19897197 19897915 Lan3g1137 3 23694580 23695228 LSH