Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1078 ATGCTGGACGACGACGTTTACGATTTGCCTCTTACTCAAACAGCACCTTCTCTCTCCAAGAAACCCAAACACAATAACTCATTCGAATTTGACAAGGACAATATTCTCGCTAACCCTAATTCACCATTCCCGAACTATTCCACTCTCGACAGCGACGATTATGCACCACACGAATTCGAAAACTGCAGCTTGGATTTCATTCCTTCAACCATAGACATAAATTGTACTACACTTCAACATTATCATGTTTCTTCTTCTCATTCTAACCATTCTTATTGTTCTGTGCCTCGTGAATTGAAGGGGGGCTATTTTGGAAAGTCAATAGAGTCTAAGCTGGTTTTATTGAGAAACGGATCTGAAAAACTCTCAGATGAAGTTGCGGAGGTTGATTCGGATTCGGAGCTTGATTCGTTATTGAAATTGTGTGATGAGTTAGAGCAATTAGATGAAGACTGTGTGATATGTCCTCTATGTGAAGTTGATATTTCAAATTTAACAGAGGAACAGCGAAATCTTCACACCAATGATTGTCTTGACAAATCACAAGATACACCTCAACATGTTCCACCACATGTTGAAGAGATAGAAGTTCAATCTGTATCAAAAGTTTCCCCTGTTGTTGATTGGCTACGTAAATTGGGTTTAGTAAAATATGAACATGTTTTTGTGAGGGAAGAAGTTGATTTTGACACCTTGCAGTGGCTGACGGAAGAGGATCTCTTAAGCATGGGTGTTACTGCACTTGGCCCCAGAAAAAAGATTGTGCATGCACTGTCTGAACTTAGAAAAGGAGCTGCCCCTAAAAATGAGGAACACCAGGATGCTCCTGCAGAGCCTAGAAGGATCAGAAACCAGAAAGTCAAATCGCAACATGACAAATCTGAAAGAAAATTTGATAGCACTAGCAAACCAGTGGGAAACAAATTAATTACTGAGTATTTTCCGGGCTTTGCTATCAATGGGAAGAACGTTTCTGCCACTCCTGGAGAACAGCCTGAAATAAAAAACAGTTGCTCAGGTTCTGGTCATAAGCACAAAGCGAAAAATACGCCAACAAATAGAAAGCTTCGCGATGTTCCCAAATGGTGTAGCATACCAGGGACACCATTCCGGGTGGATGCTTTCAAATATCTGAGAGGAGATTGTTCTCACTGGTTTCTCACACACTTCCATTTGGACCATTATCAAGGTCTTACCAAGTCGTTCAATCATGGAAAGATCTATTGTTCCTCTATCACAGCTAGGCTCGTAAATATGAACATTGGGATTCCATATGATAAATTGCATGTTTTGCCCCTGAATGAAAAGGTTAAAATATCCGATGTTGATGTGACTTGCTTGGATGCCAATCATTGCCCTGGTGCTGTTATCATACTCTTTCAACCTCCAAATGGTAAGGCGGTGCTTCACACTGGGGATTTTCGCTTTAGTGAAGAAATAACACTCAATCCTTTGCTGCGTACGTGTCCTATACATACCCTAATTCTTGATTCAACATACTGTAACCCACAGTATGACTTTCCAAAACAAGATGCTGTAATACAATTTGTTATTGATGCCATTCAAGCCGAGTCTTTTAATCCCAAGACCCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGGCTATTCCTAGAGGTTGCTCGTGCGCTTCGTAAAAAGGTTTATGTGACAGCAGCAAAGATGCGTCTTTTAAAATGTTTGGAATTTCAGGATGAGGATATGCAGTGGTTTACTTCAAATGAACATGAAAGCAACATTCATGTTGCCCCCATGTGGACACTCGCAAGCTTCAAAAGATTGAAGCATGTATCATGTCAATATTCGAGTCGGTTCAGTCTCATAGTTGCTTTCTCTCCCACTGGTTGGACATTTGGTAAAGATAAAAAGAAGTCTCCTGGGAGAAGGTGGCAGCAGGGTACTACTATAAGGTATGAAGTGCCATACAGTGAGCATAGCAGCTTTACAGAACTCCAAGAGTTTGTAAAACTTATATCTCCTGATAACATTATACCAAGCGTGAACAATGATGGACCAGAATCTGCTGATGCAATGATTTCTCTCTTGTTATCTTGA 2079 0.4045 MLDDDVYDLPLTQTAPSLSKKPKHNNSFEFDKDNILANPNSPFPNYSTLDSDDYAPHEFENCSLDFIPSTIDINCTTLQHYHVSSSHSNHSYCSVPRELKGGYFGKSIESKLVLLRNGSEKLSDEVAEVDSDSELDSLLKLCDELEQLDEDCVICPLCEVDISNLTEEQRNLHTNDCLDKSQDTPQHVPPHVEEIEVQSVSKVSPVVDWLRKLGLVKYEHVFVREEVDFDTLQWLTEEDLLSMGVTALGPRKKIVHALSELRKGAAPKNEEHQDAPAEPRRIRNQKVKSQHDKSERKFDSTSKPVGNKLITEYFPGFAINGKNVSATPGEQPEIKNSCSGSGHKHKAKNTPTNRKLRDVPKWCSIPGTPFRVDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSITARLVNMNIGIPYDKLHVLPLNEKVKISDVDVTCLDANHCPGAVIILFQPPNGKAVLHTGDFRFSEEITLNPLLRTCPIHTLILDSTYCNPQYDFPKQDAVIQFVIDAIQAESFNPKTLFLIGSYTIGKERLFLEVARALRKKVYVTAAKMRLLKCLEFQDEDMQWFTSNEHESNIHVAPMWTLASFKRLKHVSCQYSSRFSLIVAFSPTGWTFGKDKKKSPGRRWQQGTTIRYEVPYSEHSSFTELQEFVKLISPDNIIPSVNNDGPESADAMISLLLS* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1078 692 MobiDBLite consensus disorder prediction 328 353 - -
Lan15g1078 692 CDD SNM1A-1C-like_MBL-fold 350 503 - -
Lan15g1078 692 Gene3D - 198 274 IPR013761 -
Lan15g1078 692 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 153 688 - -
Lan15g1078 692 SMART SAM_4 198 264 IPR001660 GO:0005515
Lan15g1078 692 MobiDBLite consensus disorder prediction 328 346 - -
Lan15g1078 692 PANTHER DNA CROSS-LINK REPAIR 1A PROTEIN 153 688 - -
Lan15g1078 692 Gene3D - 506 653 - -
Lan15g1078 692 MobiDBLite consensus disorder prediction 263 302 - -
Lan15g1078 692 SUPERFAMILY Metallo-hydrolase/oxidoreductase 370 674 IPR036866 -
Lan15g1078 692 Pfam DNA repair metallo-beta-lactamase 575 678 IPR011084 -
Lan15g1078 692 MobiDBLite consensus disorder prediction 263 303 - -
Lan15g1078 692 Gene3D - 365 675 IPR036866 -
Lan15g1078 692 SUPERFAMILY SAM/Pointed domain 202 263 IPR013761 -
Lan15g1078 692 CDD SAM_superfamily 206 260 - -
Lan15g1078 692 ProSiteProfiles SAM domain profile. 201 264 IPR001660 GO:0005515
Lan15g1078 692 Pfam SAM domain (Sterile alpha motif) 201 262 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1078 Lan-Chr15 19769982 19775227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1078 204 258 Glycosyltransferase AT3G07170 49.091 4.97e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1078 K15340 - gmx:100816321 966.452