Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1074 ATGGCTAGTGAAAGAGATCTGTTTTCAACTGAGATAGTGAATAGAGGGATTGAGTCAACTGGACCCAATGCAGGGTCAATGACATTCTCAGTAAGGGTGAGGAGGCGCTTGCCAGATTTTCTTCAATCAGTGAACCTTAAGTATGTGAAGTTGGGTTACCATTATCTCATAAACCATGGCATTTACTTGCTCACTATACCACTTCTTCTTGTGGTGTTCAGTGCTGAGGTTGGTAGTCTCAGCAAAGAAGATCTGTGGAAGAAGTTGTGGCAAGATGCAAGTTATGACCTTGCTACTGTCTTGACTTCATTTGGTGTCTTTGTTTTCACTTTCTCTGTGTATTTCATGTCAAGGCCACGTCCTATTTATCTCATTGATTATGCATGCTATCGACCTGAAGATGAACTCAAGGTATCAAGGGAGCAGTTCATAGAGGTAGCAAGAAAATCAGGGAAATTCGAAGAAGGAAGTTTGGAGTTTCAAAAAAGAATCCTAATGTCTTCAGGAATAGGGGACGAGACCTATATCCCAAAGGCAGTAATATCATCAACTGAAAACACAGCAACAATGAAAGAAGGTCGTGCTGAAGCATCAATGGTAATGTTTGGAGCATTAGATGAACTCTTTGAAAAAACAAGAATTCGTCCAAAAGATATAGGAGTGTTAGTTGTGAACTGCAGCATCTTCAACCCAACACCATCACTATCAGCAATGATAATAAACCATTATAAAATGAGGGGTAACATATTGAGTTACAATCTTGGAGGCATGGGTTGTAGTGCTGGTATCATTGCTGTAGATTTGGCTAGGGATATTCTTCAATCTAACCCTAATAACTATGCTGTTGTTGTGAGTACTGAGATGGTAGGGTTTAACTGGTACCAAGGGAAAGAAAGGTCTATGCTTATTCCTAACTGTTTTTTTCGTATGGGTTGTTCTGCTCTTTTGCTTTCAAACCGTCGTCGTGATTATAGCCGTGGCAAATATCGTCTTGAGCATATTGTTCGGACTCATAAGGGTGCTGATGACCGTAGTTTCAGGTGTGTGTATCAAGAGGAAGATGATCAAAAATTCAAGGGACTAAAGATCAGCAAAGACTTGATTGAAATTGGTGGTGATGCTCTCAAAACCAACATCACCACACTAGGACCTTTAGTCCTACCCTTTTCTGAGCAGCTCCTATTTTTTGGCACTTTGGGGTGGAGGCACTTATTTGGTAGTAACAAAAAATCTGATGGCAACAATTTAGCATCATCAAAAAAGCCATACATCCCTGACTACAAACTAGCTTTTGAGCACTTTTGTGTGCATGCTGCAAGCAAGCCAATACTTGATGAGCTTCAAAGGAACTTAGAATTGAGTGACAGAAACATGGAGGCTTCTAGAATGACATTGCACCGTTTTGGCAACACTTCTAGCAGTAGCATTTGGTATGAACTTGCTTACTTGGAAGCTAAGGAAAGAGTGAAAAAAGGTGACCGTATTTGGCAACTGGCTTTTGGTTCTGGATTCAAGTGTAACAGTGTTGTTTGGCGTGCCATGCGTAGAGCTACAAAGGGTTCTAGGAACAACCCTTGGCTTGACTGCATCAACACATACCCTGTGTCTCTCACTTAA 1617 0.4094 MASERDLFSTEIVNRGIESTGPNAGSMTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLATVLTSFGVFVFTFSVYFMSRPRPIYLIDYACYRPEDELKVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSLT* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1074 538 SUPERFAMILY Thiolase-like 108 326 IPR016039 GO:0016746
Lan15g1074 538 Pfam FAE1/Type III polyketide synthase-like protein 114 399 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan15g1074 538 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 432 512 IPR013747 -
Lan15g1074 538 PANTHER 3-KETOACYL-COA SYNTHASE 4 535 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan15g1074 538 Coils Coil 444 464 - -
Lan15g1074 538 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 538 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan15g1074 538 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 535 - -
Lan15g1074 538 SUPERFAMILY Thiolase-like 332 513 IPR016039 GO:0016746
Lan15g1074 538 CDD CHS_like 98 511 - -
Lan15g1074 538 Gene3D - 127 513 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1074 Lan-Chr15 19738213 19741638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1074 2 537 Miscellaneous Gene Families AT2G26250 75.318 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1074 K15397 - gmx:100818799 967.607