Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1007 ATGTCCAACAATCTCGTTTCTGAGTCGATAAGAAGGTTGCAGATGGCTCAGTTTGATCCCATTGTGAACAATGTTGATTCATCAGGGCGACAGATGGAAATGGGACTTTTAGATTCCGTGTCTAGTGTTCCCGTGTCACTGCAACAGGCAACCTCAAATGTTCATGTTGGAATGTCCGGCTCTCAAGGTTTACCAACTTCAGTCATACAGAGTGGACACAAGGTAGAAGCACATATGAGTAGCCTGGGAATGGCTCACCTTTTTTTGCCTCAGAAGCAATCCGTGCAAATTGGGACAATGCCGAATAATATGGGGCCACAGCAAATGTCGACCACACCCAAGAGGAAGGTGCCTATGGAATTTTCGTATGGTAGCTCTGTGACATCTAACAAGCGGGTTGCACATATAGACAATAGACCTTGGTTGCAGCAAGTATCTACTACATCAAATAAAAGTTCTCTGCAGATGCAGTCTAATGCCTCAAGGTCACAGCACATGTCAGCATCTAGTAAGAGAAAAACACAGATGGAACCCACTTCCAGTAAACCCGGCACACCTCGTTCCGTGAATCCTAAAAGTCAAAATGCGCAGATTAAGCAAACCTCTAAGGGTCAATCTGAATCATCTGAAAGTGTCAGATCCAAGATGAGGGAGTCATTAGCTGCTGCTCTAGCCTTGGTTTCTCAGCAAGACAAACCTCTGGTTACGAACAATATTACACAACGAAAGGGTACAGCCTCTTATGAAGATTTTTCTGAAAAATGCAAGGACGATGAAGCAGGATCCACAAATGTATATAATGATGAAAGTATAAAAAGTTCTATGCAAGTCTTGAATTGTGATAACCCAGATTTCCAGTCAAGTTATACTTTGACTACTGATGATGTTCCTTTCAGTGACAGTTTCTTTGTGAAAGATGACCTTTTGCAGGGGAATGGTCTTTCCTGGGTTGTATCTGATATGATGGACCTGGAAGACCCGAGGGATTGCCAAACTACTACAGAGCATAGACCAGCTGATGAAATAGTCAGAGGTTGTAGGGAGACAGTTCTTTCACCTGAACTCTTAGCTTCAAGGATAGAAGCAGAACTCTTCAAATTGTTTGGAGGTGTTAATAAGAAGTACAAAGAGAAAGGGAGGTCTCTTTTATTCAACTTGAAAGACCGCAATAATCCTGAACTAAGAGAAAGGGTTATGTCAGGTGAAATTCCCCCAGAACAGTTATGTTCCATGACTGCAGAGGAACTTGCTTCAAAGGAGCTTTCTCAGTGGCGCATAGCCAAGGCTGAGGAGCATGAGAAAATGGTGGTCTTACATGACTCAGATGTTGATATTAGACGTTTAGTCAAGAAAACACATAAAGGTGAATTTCAAGTGGAAGTTGATCGTGAAGACAATGTCCCAATGCAGGAGGTTTCTGGTGGCACAACCTCAGTTGCTCCAAACCAAAGAACTAAAAAGGATGTGCAAGTGTCTGCTCCTAAACCTGATGTGGTCAAAGGTGATATGAGCACAGATGGTGAGAAGAACAATTTACAGAAGGATCATGATGGTTTTGATCCAATGCAAGGGCTTATGACAGATGATGCATTGAAGGACCCTGATTTTCTTCCGCCAATTGTCTCACTTGATGAGTTCATGGAATCCCTTGATTCTGAGCCACCATTTGTAAATTTACACGGGGAACCTGGAAAAGTGATACCTAGATCAAAAGTCTCTGATTTAACTCCAAGTGAGCAAGTTGATGTCACCCCTGATAAGCCTCAGAGTGATAATCGTCAGAGCACATGTGTCAACCCAGATGTTTTAGAGGGGAAAAGGAATAATGCAGAATCTGGGGGTATTTCTTCGTATATAAAACGTGCTGAGAGTCATGTTGACGTGAAGCCGACTGACGGTCGTACCAAGGAAGAGACAATTGATGAAATCAAGTCTGCTTCCAGTGTTGCTGAGTTTAGAGCTAGACAGTCTCGTGCAGAAGAGAGATCCAGTAATAATAATACTTGTTCGAAAATTACTGTCTCGACCAAGGATGAATGTTTCTGGGAGGGAATGCTTCAAGTCAATTCCAATTATTCAGTCATAAGCATCTTTAAAAGTGGTGAGAAAACTTCTGCGAAAGATTGGCCTGGGCTTCTTGAGATCAAGGGAAGGGTTCGACTTGATGCATTTGAGAAATTTCTTCAAGAGCTTCGGCTGTCAAGAAGTCGTGCTATCATGATTTTGCATTTTGTTTCCAAAGGTTCTTTCCCCAACAATGAGCAATCAAATCTGCTTGAGGTTGCTGACTCTTACATTGTGGACGAGAGAGTAGGGTTTGCTGAGCCTGTGCATGGAGTTGAACTTTACTTTTGTCCACCTCATAAGAAAACAGTTGAAATTCTCAGCAACATACTTCCAATGGAACAAATTGAGGCACTTTATTCTATTGATAATGGTCTTATTGGGGTTATTGTATGGAGAAAAACTAATTTAACAACTTCTATATCACCCACTACTACTACTTCACACCAAAAAAATAGTTTTAAAAGACAAAATTCCTCTAGGAGACAGCAAGATGCAAATTTGAATGCCTATCTCACTCACAAACCAGTGCCCTCTATGGGCCCGAAACTTGTTGAGACTGGACCACTATGTGATGATGATGATGATGACGATGATGGTGATGTTCCTCCTGGATTTGGACAACCGGTTGCCCAAGTTGAGGATGATCTACCGGAGTTCAATTTCTCCACCAGTTCAAATCCATCACATGTGGTCCAGAAACCAATGGGACCGAGTATGGTCCCATTTCGCTCAGTTAACCAATCACTCCCATCGCGCCCTGCTGAACATATGAGGGAGCTTGTGCATAAATATGGGCAAAACAAAGCAAATGCAACTTCAGTTAACTGGGAGGATAAATTTGGTGGTACAATTCAACCTTGGAACGATGATGATGATGATATACCTGAATGGCAGCCTCAAAATTCCCAGAATCAGACAATGCAAAACTTTCATGTAAGACCACACACGATGAATCAATCATTTCCAAGCTCACACCAGTACCCAATAATGCCAACACAATATCTGCAACCCCCAATGAATGTTACACATGGACAAGGAAATTTTGCCCCACCCTTGGTTCCTTCTGCCCAAGGAAACAACCTACAGCCTAATGTGGGGCACCCTTATGGAATGCCTGGGCAAGGGCAAGGCACTACTTGGCCTCAAAATGTTGCTAGAAGTAGGGGATTCTAG 3240 0.4259 MSNNLVSESIRRLQMAQFDPIVNNVDSSGRQMEMGLLDSVSSVPVSLQQATSNVHVGMSGSQGLPTSVIQSGHKVEAHMSSLGMAHLFLPQKQSVQIGTMPNNMGPQQMSTTPKRKVPMEFSYGSSVTSNKRVAHIDNRPWLQQVSTTSNKSSLQMQSNASRSQHMSASSKRKTQMEPTSSKPGTPRSVNPKSQNAQIKQTSKGQSESSESVRSKMRESLAAALALVSQQDKPLVTNNITQRKGTASYEDFSEKCKDDEAGSTNVYNDESIKSSMQVLNCDNPDFQSSYTLTTDDVPFSDSFFVKDDLLQGNGLSWVVSDMMDLEDPRDCQTTTEHRPADEIVRGCRETVLSPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEIPPEQLCSMTAEELASKELSQWRIAKAEEHEKMVVLHDSDVDIRRLVKKTHKGEFQVEVDREDNVPMQEVSGGTTSVAPNQRTKKDVQVSAPKPDVVKGDMSTDGEKNNLQKDHDGFDPMQGLMTDDALKDPDFLPPIVSLDEFMESLDSEPPFVNLHGEPGKVIPRSKVSDLTPSEQVDVTPDKPQSDNRQSTCVNPDVLEGKRNNAESGGISSYIKRAESHVDVKPTDGRTKEETIDEIKSASSVAEFRARQSRAEERSSNNNTCSKITVSTKDECFWEGMLQVNSNYSVISIFKSGEKTSAKDWPGLLEIKGRVRLDAFEKFLQELRLSRSRAIMILHFVSKGSFPNNEQSNLLEVADSYIVDERVGFAEPVHGVELYFCPPHKKTVEILSNILPMEQIEALYSIDNGLIGVIVWRKTNLTTSISPTTTTSHQKNSFKRQNSSRRQQDANLNAYLTHKPVPSMGPKLVETGPLCDDDDDDDDGDVPPGFGQPVAQVEDDLPEFNFSTSSNPSHVVQKPMGPSMVPFRSVNQSLPSRPAEHMRELVHKYGQNKANATSVNWEDKFGGTIQPWNDDDDDIPEWQPQNSQNQTMQNFHVRPHTMNQSFPSSHQYPIMPTQYLQPPMNVTHGQGNFAPPLVPSAQGNNLQPNVGHPYGMPGQGQGTTWPQNVARSRGF* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1007 1079 SMART mid_6 325 427 IPR003618 GO:0006351
Lan15g1007 1079 MobiDBLite consensus disorder prediction 554 616 - -
Lan15g1007 1079 MobiDBLite consensus disorder prediction 470 489 - -
Lan15g1007 1079 ProSiteProfiles TFIIS central domain profile. 334 444 IPR003618 GO:0006351
Lan15g1007 1079 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 31 1042 - -
Lan15g1007 1079 MobiDBLite consensus disorder prediction 573 602 - -
Lan15g1007 1079 MobiDBLite consensus disorder prediction 468 518 - -
Lan15g1007 1079 MobiDBLite consensus disorder prediction 134 216 - -
Lan15g1007 1079 SUPERFAMILY Elongation factor TFIIS domain 2 342 420 IPR036575 GO:0006351
Lan15g1007 1079 MobiDBLite consensus disorder prediction 828 850 - -
Lan15g1007 1079 MobiDBLite consensus disorder prediction 140 209 - -
Lan15g1007 1079 Pfam SPOC domain 677 820 IPR012921 -
Lan15g1007 1079 Pfam Transcription factor S-II (TFIIS), central domain 352 433 IPR003618 GO:0006351
Lan15g1007 1079 Gene3D - 330 419 IPR036575 GO:0006351
Lan15g1007 1079 MobiDBLite consensus disorder prediction 501 516 - -
Lan15g1007 1079 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 31 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1007 Lan-Chr15 19242014 19248421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1007 - - gmx:100808809 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1007 15 19242014 19248421 Lan14g0789 14 14784029 14790277 LSH