Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0992 ATGGTTGATGAAGGTGAAAAGAAAGAGACAAGTCCTACAGCCACTGTGAATGAAAAAAAGAAGCGCAAGGGATTTTTTTCTAGAATTTGGAATGTGTTTAGGTTGCAAGGTGATGATTTTGAGAAGAGGCTCCAATACATTTCTAAAGAAGAAGCTGCAGTTATCTCTAGAATGAGCAGGAGATCCAGATCATTGAGGCGAATTTCTCGGCAACTTACTATGTTTTCTGTTACATTTGAGGTAATTGCTGTAGGTTATGCTATAATGGCAACAAGAACAATGGATATGGATTGGAAAATGAGGGCAATCCGGGTTCTGCCAATGTTTCTTTTGCCTGCATTGACTTTCGCTGCATATTCAACATCTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAAAAAAATCTTGAAAGGCTTCGCGCTGAAAAGCAGGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACACAACAGCTCATTCAGAGATATGACCCAGACCCAGCCGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGTTTGAAAGTGTATGTGGAAGATGATTCTAATTTGGGTGCTGCAATGACAACGAGGAATGATGTTGAACTTATGCAGTCCACTGGACTTCGAAATCGGAAACAAGTTCAACCTAGATCCACTAGTTTGGGGACAAGTACACCAAATTATTCTGATCAAGAATTAGTTGGTTCAGGGGGAACTGACCAAACTAGTATATCTGATTATAATCAGCTTGTAGTTGTTGAGCACCACCAACCTAAAAGTTCGACCCCTCAAGATGGGGGATGGGTGGCACGACTGGCAGCATTGCTCGTGGGTGAGGATCCAACACAGTCTTATGCTCTCATATGCGGCAACTGCCATATGCATAATGGTCTAGCTAGGAAGGAGGATTTCCCTTTTGTTACTTACTACTGCCCTCACTGTCATGCCCTGAACAAACCAAAACAATCAGGTGATCATATCTCTGATCATTCTTCCCCGAACACGGGGTCTCCTCCAAAAACAGACGCTGATCAAGCCGTTAAAGATGCTATCACTTCTGTGGTTGAGAGCATAATCACAACCAATAATAGCCCTGAGATTGAGGAAGTATTAGAAGGGACAAGTTTGGAGGAGAAAGCTAGTTAA 1179 0.4249 MVDEGEKKETSPTATVNEKKKRKGFFSRIWNVFRLQGDDFEKRLQYISKEEAAVISRMSRRSRSLRRISRQLTMFSVTFEVIAVGYAIMATRTMDMDWKMRAIRVLPMFLLPALTFAAYSTSVSFTRMCDRRDQKNLERLRAEKQAKIDELKEKTNYYITQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYVEDDSNLGAAMTTRNDVELMQSTGLRNRKQVQPRSTSLGTSTPNYSDQELVGSGGTDQTSISDYNQLVVVEHHQPKSSTPQDGGWVARLAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFVTYYCPHCHALNKPKQSGDHISDHSSPNTGSPPKTDADQAVKDAITSVVESIITTNNSPEIEEVLEGTSLEEKAS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0992 392 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 11 380 IPR040115 GO:0071786
Lan15g0992 392 MobiDBLite consensus disorder prediction 338 352 - -
Lan15g0992 392 MobiDBLite consensus disorder prediction 373 392 - -
Lan15g0992 392 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 279 329 IPR019273 -
Lan15g0992 392 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 11 380 - -
Lan15g0992 392 MobiDBLite consensus disorder prediction 332 360 - -
Lan15g0992 392 Coils Coil 134 157 - -
Lan15g0992 392 MobiDBLite consensus disorder prediction 218 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0992 Lan-Chr15 19137496 19140994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0992 K23292 - gmx:100797087 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0992 15 19137496 19140994 Lan14g0779 14 14673293 14677372 LSH
Lan10g0984 10 14884625 14898013 Lan15g0992 15 19137496 19140994 PCT
Lan15g0992 15 19137496 19140994 Lan10g0984 10 14884625 14898013 PCT