Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0965 ATGGTAGAAGGAGGTGGTGAAGAAGAACCCGAATTCAAGTGGGGGATAAAGGGAATGTTAGGTGGTAAAAAGAAGGATGTGCAATTTTATGAATCGTTTCGATACGATGGTGTTGATTACAAACGTTATGATTCTGTGTATTTTTACAAGGAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAGATATGGGAGAATGCTGATAAGTCTAAGAAAGTGAAGGTTTTATGGTTTTTTCGACCTTGCGAGATTTTGAATTTTTTGGAAGGGATTGAGACACTTGAGAATGAGTTGTTCTTAGCATATGGTGATGGCTTAGGGCTTGCAAATATCAATCCTCTGGAAGCTATTTCTGGGAAGTGCAATGTTGTTTGTATTGCTAAGGATAGTAGGAATCCTCAGGTATCAGATGAAGAATTTCAAGATGCTGAATTTGTATTCTCTCGCTTCTTTGATGTTGGGAAGCGTAATATATTGGATAGGATAGATGATGATAAGATTGCTGACATTGAAGTTAAAAATATTTTTAACAATTTAGATAGTCAAAAGGCCGTTGGTGTTGTGAAACTTGATTTAGACAAGAAAGAAGGTAGTGGGAAAGTCAGGACGAGTAATGAAGTTGTGGATCTTCCGAATCAAAAAAATAGCCAGCCCGTAATGGGAAAGGCGAATGGTAAGGGTTTTGCCACGTTAGTTAGAGAAAATCTCGTGTCTAAGCCTTCGTCTGGAGAAAAACCAATCTCTCGCAATGGTGTAATTGAAGCAAGTAAATCTGGTGACAAGACCATGCCTCAAGCTAAAGTAAAAGGGAATGGGATTTCTAATGCATCTTTGGTTAAGCAAAAATCATCTACTAAACCATCATATGGTTCTAATGACTGTGGAATGAAGAGAATAACTAAGTCGAATGATAAACAAGGAAATATCTCTGGTGAGAAGACCCCGTCAAGGTCTAAGGTTGATTCAGAAAAGGGTGAATGCAATGTTGTTGGGGGTCTTGTTGGGAATATCAACAAGGGATCCACCGAGGCCAATATAGAGAAGGAAAAATCTAGTAATTCTATTAAAGTCTCTAACGAGAAGTTAAAACGTGACTTGCAAAATCAGAGACTTGTTTCCAATGATGGTGATATGAACAAAATATCTCCATCTCCATCTAAGTCTGATTCAGAAAAGGGTGGATGCAAGGTTGGCAATCTTGTTCGGAAAATTAACAAGGGATCAATTGATGAAAAGGGGAAGCAAAAATGTGGCGATTCTAACTTGCAAAGTCGAAGAATTGTTTCCAATGATGATGCGAAGAAAGTAGCCACGTCTTCATCAAAAGATAAATACAAGCTTCAACGTGAAAAGGATTTTTCTGATGGAGAGGATGTTCCTTCAAAGAAGTTAAAGCTTGACCATAAGCCAATGAGACTATCTGATGATAAATTGCGCAAAAAACCTACAGATTCTTTGAATTTGGAACAAAAGTTAAATCGATGTGCAAATGATGTTACTAGACGACCTGACACTGATAGAAGCAGGTGGTTTAAGGGATTTCCTTGGGAAGAAAGAATGAAGTCTGCTTATGAGCAAGGAACACTTGTGTTACTTAAGAACTTGGATCCATCTCTAACTTCAGGAGAGGTAGAGGATATTATTTGGAATGGCTTTAATGAAAGTTGCACTGCAAAGATGATCCAGAGAACTGCATTTTCTAGCCCTCATTCTGGTCAAGCTTTTGTTATATTCAAAAAAAGGGATGCAGCGGAGTTGGTTGCTAAAAAATTAGACAAGGGGTGTTTCTTAATGTCAAATGGACGCCCGCTTGTTGGAAGCATTGGACGTCCCTGCTTTCCAGAAAAGAAGCCAATATTTTATGGTCATCATGTTGTCGATCAACATAGAACACATATGCAACGTGAGATGAAAGATGCTGTGTCTACTTCACATTGTTCTCAGCCCAATAATATTGAATATGAGATGGCCTTGGAATGGTGTTTGCTACAAGAAAGAGGAGACAAAGCATGGAGTAGATTGTTTAAGGCACACGAGGAGGAGTTGAGAAAAGTCAAAGCAAAGATGAAGTCTAAATGA 2082 0.3828 MVEGGGEEEPEFKWGIKGMLGGKKKDVQFYESFRYDGVDYKRYDSVYFYKEGEPEPFIGKIIKIWENADKSKKVKVLWFFRPCEILNFLEGIETLENELFLAYGDGLGLANINPLEAISGKCNVVCIAKDSRNPQVSDEEFQDAEFVFSRFFDVGKRNILDRIDDDKIADIEVKNIFNNLDSQKAVGVVKLDLDKKEGSGKVRTSNEVVDLPNQKNSQPVMGKANGKGFATLVRENLVSKPSSGEKPISRNGVIEASKSGDKTMPQAKVKGNGISNASLVKQKSSTKPSYGSNDCGMKRITKSNDKQGNISGEKTPSRSKVDSEKGECNVVGGLVGNINKGSTEANIEKEKSSNSIKVSNEKLKRDLQNQRLVSNDGDMNKISPSPSKSDSEKGGCKVGNLVRKINKGSIDEKGKQKCGDSNLQSRRIVSNDDAKKVATSSSKDKYKLQREKDFSDGEDVPSKKLKLDHKPMRLSDDKLRKKPTDSLNLEQKLNRCANDVTRRPDTDRSRWFKGFPWEERMKSAYEQGTLVLLKNLDPSLTSGEVEDIIWNGFNESCTAKMIQRTAFSSPHSGQAFVIFKKRDAAELVAKKLDKGCFLMSNGRPLVGSIGRPCFPEKKPIFYGHHVVDQHRTHMQREMKDAVSTSHCSQPNNIEYEMALEWCLLQERGDKAWSRLFKAHEEELRKVKAKMKSK* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0965 693 SUPERFAMILY RNA-binding domain, RBD 520 606 IPR035979 GO:0003676
Lan15g0965 693 MobiDBLite consensus disorder prediction 429 481 - -
Lan15g0965 693 MobiDBLite consensus disorder prediction 238 481 - -
Lan15g0965 693 CDD RRM_SF 531 605 - -
Lan15g0965 693 MobiDBLite consensus disorder prediction 372 390 - -
Lan15g0965 693 MobiDBLite consensus disorder prediction 344 371 - -
Lan15g0965 693 PANTHER PROTEIN ANTI-SILENCING 1 1 692 - -
Lan15g0965 693 MobiDBLite consensus disorder prediction 406 420 - -
Lan15g0965 693 Pfam BAH domain 39 154 IPR001025 GO:0003682
Lan15g0965 693 SMART BAH_4 38 164 IPR001025 GO:0003682
Lan15g0965 693 MobiDBLite consensus disorder prediction 269 316 - -
Lan15g0965 693 Gene3D - 7 161 IPR043151 -
Lan15g0965 693 PANTHER PROTEIN ANTI-SILENCING 1 1 692 - -
Lan15g0965 693 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Lan15g0965 693 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 529 612 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0965 Lan-Chr15 18930328 18941239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0965 - - lang:109328093 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0965 15 18930328 18941239 Lan3g1495 3 26437073 26446427 LSH