Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0962 ATGGTTGGTCTCCTTCATCTCCCACGGTTCCCTCTCTCCATCTTTCTCCGCTCCCATTCCACTCCTTTCTCAACCTCAAAATTCCCCACCAGAACCACTCTCTTCTTCTCACCCAAATCAACCCTAACCACACCAGAACCAATAACCGATAACGATTCACCTTCCTCAGATTCAGAAATCCCTCATGTAGAGTTATCTCTCGATAAGCTTTTTATACCACCGGAGACACGTGTCCCTGTTGATAGTGGTAGTGCTAGAATCCTTAAAGGTTCCAACATAGTGTTGAGCAATTACGCTCGTGATTCAAATGTAGTGCAAGCTGATTATGTTAAAAGTAGTGTTAGAACTGAGGATTGTCCTTCTGATGGTTTACCTGAGTTTGCTCTTGTTGGACGTTCTAATGTTGGCAAATCCTCACTCCTTAATTCCATTGTTCGTCGAAAGAAGCTTGCCCTAACGTCCAAGAAGCCTGGCAAGACACAATGCATCAACCATTTCAAGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCTCAGGAACTTAGAATGAATTGGGACAATTTCACCAAGGACTATTTCCTTAACCGGTCAACCTTAGTTTCAGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAGATAGATCTCGACTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACTATAATCTTCACTAAATGTGACAAGCGGAAGAAGAGAAAGAATGGAGGCAGGAGACCAGAAGAAAATGTTAATGATTTTCAGGACTTGATACGTGGCTCCTTCGAAACAGTGCCTCCATGGATCATGACCAGTAGTGTTACCAATCAGGGTCGTGATGAGATACTCCTTCACATGGCCCAGCTACGAAACTACTGGCTCAAGCACTAG 924 0.4372 MVGLLHLPRFPLSIFLRSHSTPFSTSKFPTRTTLFFSPKSTLTTPEPITDNDSPSSDSEIPHVELSLDKLFIPPETRVPVDSGSARILKGSNIVLSNYARDSNVVQADYVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKINDSWYLVDLPGYGYASAPQELRMNWDNFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKRKNGGRRPEENVNDFQDLIRGSFETVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0962 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 303 IPR027417 -
Lan15g0962 307 Hamap Probable GTP-binding protein EngB [engB]. 112 301 IPR019987 GO:0005525
Lan15g0962 307 Gene3D - 99 303 IPR027417 -
Lan15g0962 307 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 63 304 - -
Lan15g0962 307 CDD YihA_EngB 126 300 IPR030393 GO:0005525
Lan15g0962 307 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 123 303 IPR030393 GO:0005525
Lan15g0962 307 Pfam 50S ribosome-binding GTPase 127 244 IPR006073 GO:0005525
Lan15g0962 307 MobiDBLite consensus disorder prediction 38 59 - -
Lan15g0962 307 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 108 295 IPR019987 GO:0005525
Lan15g0962 307 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 63 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0962 Lan-Chr15 18892149 18895352 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0962 K03978 - gmx:100784426 464.922