Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0959 ATGAAGAACACCGAGCGATTTGCCAATTTGGCCTTAGCAGGTTTAACCTTAGCACCGCTTGTTGTGAAAGTAGATCCAAATTTAAATGTTATTTTGACGGCTTGCTTGGCTGTGCTTGTGGGCTCTTACCGTTCGGTCAAACCAACCCCACCAACTGAGACAATGTCCAGAGAACATGCCATGCGTTTTCCCTTTGTTGGGAGTGCAATGTTATTATCACTTTTCTTGCTCTTTAAGTTTCTGTCTAAGGACTTGGTGAACACTGTATTGACAGCCTACTTCTTTGTACTTGGGATTGTTGCACTTTCGGCTACATTGCTACCATCAATCAAACGTTTTCTGCCAGACCATTGGAATGAGAACCCCACAGTCTGGCGTTTTCCGTATTTCAGCTCCCTGGATATTGAGTTTACAAAGTCACAGCTGGTGGCAGCTATTCCTGGGACTTTTTTCTGTGCCTGGTATGCTTTGAAGAAGCATTGGCTGGCAAATAACATGTTAGGTCTTTCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGATCTTTCAAGACTGGCGCTATTCTCTTGGCTGGTCTATTTGTGTATGACATTTTCTGGGTTTTCTTCACTCCTGTGATGGTTAGCGTTGCAAAATCATTTGATGCTCCAATTAAGCTTTTGTTCCCCACATTTAATTCGGCAAGACCATTTTCTATGCTTGGACTTGGTGATATTGTTATCCCTGGTATTTTTGTAGCATTGGCTTTGCGGTTTGACGTTTCTAGAGGAAAACAGCCCCAGTACTTCAAGAGTGCATTTTTCGGATATGCTTTTGGCGTGGTCCTTACTATTGTTGTGATGAACTGGTTTCAAGCTGCACAGCCTGCTCTTTTGTATATCGTCCCCTCTGTAATAGGATCTTTGGCTGCTCATTGCATATGGAATGGTGATGTCAAGCAGTTATTGGAATTCGATGAGGCAAAGACTGCAAATTCATCTGAAGAAGTTGATGACAAATCTAGTAAAAAGGTTGAATAA 1023 0.4203 MKNTERFANLALAGLTLAPLVVKVDPNLNVILTACLAVLVGSYRSVKPTPPTETMSREHAMRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFVLGIVALSATLLPSIKRFLPDHWNENPTVWRFPYFSSLDIEFTKSQLVAAIPGTFFCAWYALKKHWLANNMLGLSFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTFNSARPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFFGYAFGVVLTIVVMNWFQAAQPALLYIVPSVIGSLAAHCIWNGDVKQLLEFDEAKTANSSEEVDDKSSKKVE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0959 340 SMART psh_8 51 310 IPR006639 GO:0004190|GO:0016021
Lan15g0959 340 Pfam Signal peptide peptidase 51 322 IPR007369 GO:0004190|GO:0016021
Lan15g0959 340 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 340 IPR007369 GO:0004190|GO:0016021
Lan15g0959 340 PANTHER SIGNAL PEPTIDE PEPTIDASE-RELATED 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0959 Lan-Chr15 18868042 18874094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0959 K09595 - gmx:100784956 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0959 15 18868042 18874094 Lan14g0754 14 14497591 14503062 LSH
Lan15g0959 15 18868042 18874094 Lan3g1499 3 26511566 26518011 LSH