Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0920 ATGTGTAACCCAAAGCCACTTTGTCCTACAAAAACTCACCTCATAACTCCATACCCCAAACTCATGAAGCCTCATCATCATGATGATCAAGTTCAAGATGAACTTCATAGATGGCCAACTCCTAATGAGGTTTTGGAAGAAATCAAAGCCATAGGGAAGATATCAGGACCAACTACTATAACTGGATTACTTTTATATTCAAGAGCTATGATTTCTATGCTTTTTCTTGGTTACCTTGGTGAAATGGAACTAGCAGGAGGTTCTCTTTCTATTGGTTTTGCTAACATCACTGGCTACTCTGTGATAACAGGGTTAGCCATGGGAATGGAACCAATTTGTGGTCAAGCTTATGGAGCAAAACAAATGAAGATTCTTGGTTTGACCCTTCAAAGAACAATACTACTTCTTCTTTCAACTTCCATTCCTATCTCATTTACATGGCTTAACATGAAGAGAATCCTCTTATGGTGTGGCCAAGACCATGAAATATCATCTATGGCACAAACTTTCATTCTATTTACCATACCTGACCTTTTCTTCCTCTCACTTCTTCACCCTCTTAGAATCTATTTAAGGACCCAAGGCATTACATTACCACTAACATATTGCTCAGCTATATCTATTCTTCTTCATGTCCCTTTGAATTTCCTCCTAGTGGTTCATTTCAACATGGGTATAACAGGGGTAGCATTGGCAATGGTTTGGACTAATCTCAACCTCTTTCTCTTCCTTTCATCTTTTATCTACTTCTCAGGTGTATATAAAGATTCTTGGGTATCACCAAGCATGGATTGTCTTAGAGGTTGGTCTTCATTGCTTGCACTTGCTATCCCAACTTGTGTCTCAGTTTGCCTTGAATGGTGGTGGTATGAACTCATGATACTATTGTGTGGGCTCCTTGTGAATCCAAAAGCTACCATTGCTTCAATGGGAATACTCATTCAAACAACTTCATTGGTCTATGTTTTCCCATCATCTCTTAGCCTTGGTGTTTCAACAAGAGTTGGTAATGAGTTAGGTGCAAAAAGACCTATAAAAGCCAGGGTTTCTATGATAGTATCACTCTTTTGTGCTGTTGGTATAGGCATAGGAGCTTTGATTTTCACCACCTTGATGAGGCACCAATGGGGAAAATTCTTCACAAATGATCAAGAAATTCTTGACCTTACTTCAATAGCATTGCCAATTATTGGCTTGTGTGAGCTTGGAAACTGTCCTCAAACCACAGGCTGTGGAGTCCTTAGAGGTACTGCAAGACCAACTATTGGAGCAAACATAAATTTGGGTTCTTTTTACTTGGTGGGTATGCCTGTGGCTATTGTTCTTGGGTTTGTGGCTAAAATGGGATTTTCTGGGCTCTGGCTTGGGTTACTTGCAGCCCAAGCCTCATGTGCAACTCTCATGCTATTTGTTCTCTTCACAACTGATTGGAATGCACAAGTTGAAAGAGCAAAGGAACTTACAAAAACATCAAATGCTGCTAATACCACTATTGCTACTTCCACAACATTACCAACATTCACAAAAGCAGAGTTGAACAAGAATGATAATGATGCTGCTATTCTTGAAGAGATAGTTATTACAAATGATGAGGCTGCTAAGACATGCCCACTTGAAACAGATCCACTCATCATAACTTCTACCAAACACACTGTAAATTAG 1662 0.3947 MCNPKPLCPTKTHLITPYPKLMKPHHHDDQVQDELHRWPTPNEVLEEIKAIGKISGPTTITGLLLYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVITGLAMGMEPICGQAYGAKQMKILGLTLQRTILLLLSTSIPISFTWLNMKRILLWCGQDHEISSMAQTFILFTIPDLFFLSLLHPLRIYLRTQGITLPLTYCSAISILLHVPLNFLLVVHFNMGITGVALAMVWTNLNLFLFLSSFIYFSGVYKDSWVSPSMDCLRGWSSLLALAIPTCVSVCLEWWWYELMILLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGAKRPIKARVSMIVSLFCAVGIGIGALIFTTLMRHQWGKFFTNDQEILDLTSIALPIIGLCELGNCPQTTGCGVLRGTARPTIGANINLGSFYLVGMPVAIVLGFVAKMGFSGLWLGLLAAQASCATLMLFVLFTTDWNAQVERAKELTKTSNAANTTIATSTTLPTFTKAELNKNDNDAAILEEIVITNDEAAKTCPLETDPLIITSTKHTVN* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0920 553 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 501 - -
Lan15g0920 553 TIGRFAM matE: MATE efflux family protein 69 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan15g0920 553 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Lan15g0920 553 Pfam MatE 278 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan15g0920 553 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan15g0920 553 PANTHER PROTEIN DETOXIFICATION 27 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0920 Lan-Chr15 18512077 18514242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0920 K03327 - rcu:8288072 846.654