Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0891 ATGATTGATTTATTTATTTTAACTTGTCAACCTTCCTTTCGCAGTTGTTATGCTAATGCTGTTCTTCAGTGCTTAGCATTTACACCACCCTTGACTACTTATTTCCTTCAAGGACTGCATTCTAAAGCATGTACAAATAAAAAGTGGTGTTTCACCTGTGAGTTTGAAAGCTTAATTTTGAAGTCAAAGGGAACAAAATCTCCACTCTCTCCTATTGGCATACTATCTCAACTACAAAATATTGGGAGCCAGCTTGGTAATGGCAGGGAAGAAGATGCACATGAATTTCTCAGGCATTCTATTGACACAATGCAATCAGTTTGCCTTATGGAAGCTTGGGCTAACACACCGAGTTCATTGGAAGAGGAAACTACTTTAATGGGTCTTACATTTGGAGGCTACCTTCGATCAAAGATAAAGTGCATGAAATGTGGAGGGAAGTCTGAGCGCCAGGAAAGGATGATGGATCTGACTGTTGAGATAGGAGGGGAGATAGCAACCTTGGAGGAGGCCCTTCGACGGTTTACAAGTACTGAGACTTTGGATGGAGAAAACAAGTACCACTGTGTTAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCTAATGTTCTTACAATTGCATTGAAGAGATTTCAGTCTGGGAAATTCGGGAAGCTCAACAAGCCTATTCATTTTCCTGAAGTACTTGACTTGGCACCTTTCATGAATGGGACTAGTGATAAATCTCCTATATACAGACTGTATGGGGTAGTAGTTCACTTGGATATCATGAATGCTGCCTTTTCGGGTCACTATGTGTGCTATGTGAAGAATATCCAAAACAAGTGGTTCAAGATTGATGACAGTGTGGTGATACCTGTTGAGTTGGATAGAGTCTTAACAAAAGGAGCATATATGCTTTTTTATGCAAGGTGCTCTCCAAGGGCCCCAAGGATAATCAGGAACATCATAGTATCCCCAGATTCAAAAAGTAAGGTCAATGGAAAGACACTTGCAATGAAACCAAGACATATATCTACAAATATTAGTGCTGCTGAATATATCAGTAGTCCGATTTCTCCGGATGGTTCACCCACCTTAGACTCTTTCTATTCAAAGTTTCACCACCTGAGAAGGATTTTAGAAGAAGACTCGTCAAGTGATAGTTCATCACTCCTCAGCAGCAACTCTGATGAAGGTTCTTGTAGTACCGATAGCACCCGTGATTCAACCAGCACAGATGACTTCTCCGATTATATTTTTGGTGATTCAGGGAATGGCTGGAGCAGCACATGGAGGAATTCTGATTCTGATTTTTCATTCACACCATCTTCATCATTGAACTCTAGGCATTCACCCCTATCTGATATGGACCGGCATGATTCAGTTTCTCCAACTGCGAATAGGTTGCAAAATCCCACAGGTTCAGGTGGAGGTGTTTCTCTTCTTCGTTGA 1455 0.4124 MIDLFILTCQPSFRSCYANAVLQCLAFTPPLTTYFLQGLHSKACTNKKWCFTCEFESLILKSKGTKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRHSIDTMQSVCLMEAWANTPSSLEEETTLMGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIGGEIATLEEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTIALKRFQSGKFGKLNKPIHFPEVLDLAPFMNGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSVVIPVELDRVLTKGAYMLFYARCSPRAPRIIRNIIVSPDSKSKVNGKTLAMKPRHISTNISAAEYISSPISPDGSPTLDSFYSKFHHLRRILEEDSSSDSSSLLSSNSDEGSCSTDSTRDSTSTDDFSDYIFGDSGNGWSSTWRNSDSDFSFTPSSSLNSRHSPLSDMDRHDSVSPTANRLQNPTGSGGGVSLLR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0891 484 MobiDBLite consensus disorder prediction 459 478 - -
Lan15g0891 484 Gene3D Cysteine proteinases 13 321 - -
Lan15g0891 484 MobiDBLite consensus disorder prediction 387 416 - -
Lan15g0891 484 MobiDBLite consensus disorder prediction 443 484 - -
Lan15g0891 484 Pfam Ubiquitin carboxyl-terminal hydrolase 15 309 IPR001394 GO:0004843|GO:0016579
Lan15g0891 484 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 468 - -
Lan15g0891 484 SUPERFAMILY Cysteine proteinases 15 311 IPR038765 -
Lan15g0891 484 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 15 468 - -
Lan15g0891 484 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 7 312 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0891 Lan-Chr15 18197454 18201353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0891 15 315 Miscellaneous Gene Families AT2G24640 52.318 1.59e-114 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0891 K11855 - gmx:100795674 716.842