Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0871 ATGGCCCAACAAAAAAGGCTAAGAATTCTCGCTCACAAACTCAAAGACAAAGCGTCAGTGATTGCAGCAGTGTTATCCATCAAGCGCCACGAGTCCTCCGTCCATGTCCACGTCATTCGCGCCACCACCCACGCCCTCGCCGCCCCTCCCTCAGAGTCAAGAATCGCCGCTGTTCTCAACGTTGGCCACGGCCCATACCAGCAGCTCCCACGCGCATGCATCGACGCGCTCATGGACCGTCTTCACTACACGCGCAGCGCCACTGTCGCCATGAAATGTCTATTCACCCTCCACAACGTTGTTGTAAAAGGCCCTTTCACGCTTAAGGATCAACTTTCTTATTACCCTTCATACGGTGGCCATAATTTTCTTAACCTGTCCACTTTTCGTGATGACTCGGACGTTGAATCGGTTGAACTCAGTTCTTGGCTTCGTTGGTACGCTGTTGTTCTAGAACAGTGTTTAACGGTTTCGAGAATCTTGGGTTATTATCTTCACCCTTCTTCGAATAACAGCGTTAAGGAATATCCTGCCCACGATAGAAAGTCTTTGGTTTTTGGTTTTTCGAACGCTGATTTGTTATATAAAATGGAAGGTCTTGTGCAATTTGTTGAACAAGTGAGTTGTGTCCCTGAGTCATTGCACCTTCAGAAGAACGAGTTAGTTTATGAAGTGGTGCGATTGGTGGGTGAAGATTATAGAAGCGTTCAACGTGAGATTTTGTTGCAGGTTGAGGAACTTGGGAATAGAACGGAGGATATGGATGTTGGGGAATTAAACGAGTTGTTGGGGTATTTGCGAAGATTGGAGGAAAGTAAAGAAAATTTGGTGCGTTTGTTTGTGAATAGAATTAAGAATAATGGGTTTTGGGATTTGGTTAAGAAGGTTAAGATGAAAGTGTTGGCGATGAAAGAGGAGATAGAGGGGAAGTGGCTCACGGTTGTTACATCCACAGCCACCGAGTTGACTCGGTCCACGAACCCGTTTCTTGAGCCGGGACAAATCGTTCCGGTCCCACCGTCAAGTTTTGCAACGGTATGA 1041 0.4678 MAQQKRLRILAHKLKDKASVIAAVLSIKRHESSVHVHVIRATTHALAAPPSESRIAAVLNVGHGPYQQLPRACIDALMDRLHYTRSATVAMKCLFTLHNVVVKGPFTLKDQLSYYPSYGGHNFLNLSTFRDDSDVESVELSSWLRWYAVVLEQCLTVSRILGYYLHPSSNNSVKEYPAHDRKSLVFGFSNADLLYKMEGLVQFVEQVSCVPESLHLQKNELVYEVVRLVGEDYRSVQREILLQVEELGNRTEDMDVGELNELLGYLRRLEESKENLVRLFVNRIKNNGFWDLVKKVKMKVLAMKEEIEGKWLTVVTSTATELTRSTNPFLEPGQIVPVPPSSFATV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0871 346 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 - -
Lan15g0871 346 SUPERFAMILY ENTH/VHS domain 32 162 IPR008942 -
Lan15g0871 346 Gene3D - 5 163 IPR008942 -
Lan15g0871 346 ProSiteProfiles ENTH domain profile. 26 165 IPR013809 -
Lan15g0871 346 CDD ANTH_N_AP180_plant 35 158 - -
Lan15g0871 346 Pfam ANTH domain 35 280 IPR011417 GO:0005543
Lan15g0871 346 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0871 Lan-Chr15 17966437 17967880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0871 - - gmx:100788852 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0871 15 17966437 17967880 Lan14g0673 14 13673003 13674373 LSH