Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0844 ATGGAGGAGCGGATCCTACCGCCGCCACCACCACCTCATCCTCAACCTTATGACCCGGGTAGCCCCAAACTACAGGTACCCTACATTGGCCCTGGGACCTATGTGGTACAGGTCCCAAAGGACCAAATCTACCGCATTCCTCCACCGGAGAACGCTCGAATAGCTGAGAGTTATCGGAATTCTCCGGGGAAGGACAAGAAGAGATCATGCAGTTGTTGGTGTTGTGTTTGTTTAATTGTTTTCATCGTTATTCTTATTATTATTGGAGCCATAGTTGGTGGCCTTTTCTCCATTGTATTGAAGCCAAAGAGTCCTAGGTTTTCTATTCAACGTTTTCAACTCAAAAACTCAACCAACCCTATATACAACATCACATTAAAAGTCAACAATCCAAACTCCAACGTAGGCATCAATTATAAAGAAGGAGGTGACGTTTCCCTCTCTTTAAAGCAAAGAGAAATTGCTTCAGGAGCTTACCCTAGTTTCTTTCAAGCCCGTGATAATTCAAAGGAGTTTCGATTGGCTATGAAAGCCTCAAAAGGTGGTTTACCTAAAGAGGTAGATAAAAGCATGTCAAACAAGAAAAAGAAAGTGAATGTCAAATTCACCTTAAGCATTAAAGTCCATGCACAAATGAAGATGTGGTATTTCCATAGTGGGACAATGACATACGATGTTATGTGCCAAGTGAAAGTGGATACGTTGGCGAAGAACACTCAAGTCATAACTCATAAAGGACCAGGTTGTGTCGTAAGACCCACAAGCTATGATGACGGGCTAAGCCCAAAGGATAAGGATACTGAGAATCCTGAAGTATTTTCAGATGGCTCAAATCAAGATCAGGATGGTTAG 852 0.4249 MEERILPPPPPPHPQPYDPGSPKLQVPYIGPGTYVVQVPKDQIYRIPPPENARIAESYRNSPGKDKKRSCSCWCCVCLIVFIVILIIIGAIVGGLFSIVLKPKSPRFSIQRFQLKNSTNPIYNITLKVNNPNSNVGINYKEGGDVSLSLKQREIASGAYPSFFQARDNSKEFRLAMKASKGGLPKEVDKSMSNKKKKVNVKFTLSIKVHAQMKMWYFHSGTMTYDVMCQVKVDTLAKNTQVITHKGPGCVVRPTSYDDGLSPKDKDTENPEVFSDGSNQDQDG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0844 283 SUPERFAMILY LEA14-like 91 217 - -
Lan15g0844 283 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 242 - -
Lan15g0844 283 Gene3D - 98 235 - -
Lan15g0844 283 MobiDBLite consensus disorder prediction 7 21 - -
Lan15g0844 283 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 14 242 - -
Lan15g0844 283 MobiDBLite consensus disorder prediction 247 283 - -
Lan15g0844 283 MobiDBLite consensus disorder prediction 1 23 - -
Lan15g0844 283 Pfam Late embryogenesis abundant protein 125 214 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0844 Lan-Chr15 17648030 17649181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0844 31 244 EF-hand Containing Proteins AT5G21130 31.532 2.85e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0844 - - aprc:113853148 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0844 15 17648030 17649181 Lan14g0646 14 13399097 13400284 LSH