Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0839 ATGGCCGCTGAAGCATGCTACCAGACTATTGGGACTTTCCAGTCCTGTTCCTTACAAAATAATTTTAATCATCACCAAAAGCTTCAGAACAATTTATTAAAATTTATGACAAAGGATTTCATAAATATTAATGGCTTGTCAAGCAGAGGAAGTTACCACTCTGGTCAGAGGAACCGTGGTATAATTCGATCTTCAGCTTCCCAAACATCGTTGGTTGATCCAGTGTCATCCCCTTCAAGAAGTGACACTGGTGAAACTAACAAGAAATCAAGTGAAGCAGCTTTGATCCTTATTCGGCACGGTGAGTCTTTATGGAATGAAAAGAACTTATTCACAGGTTGTGTTGATGTCCCACTGAGCAAGAAGGGCATTGATGAGGCAATTGAAGCTGGCAAAAGAATTAGCAGCATTCCCGTTGATGTCATATTTACATCTGCTTTGATCCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTAAGAAGGTGCCTGTCTTTATGCATAATGAGAGTGAACAAGCAAGGGCTTGGAGTCAAGTTTTTAGTGAGGATACAAAAAAGCAGTCCATTCCGGTCATAGCATCTTGGCAACTAAATGAAAGAATGTATGGGGAACTACAGGGTCTCGATAAGCAAGAAACAGCAAATAGATATGGGAAAGAACAAGTCCATGTGTGGCGTAGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCCGTTGCCTATTTCAGAGACCAAATTGAACCTCAGCTTTTATTGGGTAAGAATGTTATGATTGCTGCACATGGGAATTCACTGAGATCTATTATCATGTATCTCGACAAATTAACTTCCCAAGAGGTCATTAGTTTAGAACTCTCAACTGGGATTCCCATGCTTTACATTTTAAAGGAAGGAAGATTCATTAGGAGGGGAAGTCCTGCAGGACCATCTGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCTTTACAGGCAGAAGTTGGACGAGATGTTCTAA 1035 0.4145 MAAEACYQTIGTFQSCSLQNNFNHHQKLQNNLLKFMTKDFININGLSSRGSYHSGQRNRGIIRSSASQTSLVDPVSSPSRSDTGETNKKSSEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPVFMHNESEQARAWSQVFSEDTKKQSIPVIASWQLNERMYGELQGLDKQETANRYGKEQVHVWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLLGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYILKEGRFIRRGSPAGPSEAGVYAYTRRLALYRQKLDEMF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0839 344 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Lan15g0839 344 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Lan15g0839 344 Pfam Histidine phosphatase superfamily (branch 1) 95 162 IPR013078 -
Lan15g0839 344 Pfam Histidine phosphatase superfamily (branch 1) 189 297 IPR013078 -
Lan15g0839 344 Gene3D - 84 317 IPR029033 -
Lan15g0839 344 PANTHER PHOSPHOGLYCERATE MUTASE 1 343 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lan15g0839 344 CDD HP_PGM_like 95 314 IPR013078 -
Lan15g0839 344 SMART PGAM_5 94 280 IPR013078 -
Lan15g0839 344 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lan15g0839 344 MobiDBLite consensus disorder prediction 66 89 - -
Lan15g0839 344 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0839 Lan-Chr15 17606973 17611109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0839 K01834 - gmx:100802621 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0839 15 17606973 17611109 Lan14g0643 14 13370182 13374294 LSH