Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0816 ATGCATCCTCTCTGCTGTGTTTCCGCGATTTCCGATCAGTCATCACCAGTCAAACCTTCACCAACTCATTTCCCTGACTTCACTACCACCACCATGCCTCCGCTTCCTTCCACCGCCGCCGCAATTGGATCCGATTCGATGCCCGGACACAGTCGTAACCACAGTCACGGAAGCATTCTCTCCGTCGATTACACGCGCCTTAGTCAGCGTGAACAGATACAGCAGCAGCAACCGGCGGTGGTGATGGAAGTGAAGATCAACGACCTCGTTGGAAACGGAATCTCTGGAGTACTTCACAAGTGGGTGAATTATGGTAAAGGATGGAGGCCTAGATGGTTCGTGCTTCAAGACGGTGTTTTATCCTACTACAAGATTCACGGTCCTGATAAGATCATCGTCAATTCTGAAACCGAGAAAGGATCCAAAGTCATCGGTGAAGAATCCGTTCGTAGAATCTCTCGTAAAAGCAATTCATATTTTTATCAACACCGTCGCAAACCTTTCGGTGAAATCCACCTCAAGGTTTCGAGTATTCGAGAGAGTAAATCAGATGATAAGAGATTTTCGGTGTTTACGGGAACTAAGACGGTGCATTTGAGGGCAGATACGCGAGAAGATAGAGTGGCATGGATGGAGGCATTGCAGGCAGTGAAGGGTATGTTCCCTCGGATGTCAAACAGTGAGCTCATGGCTCCCGTGGACAATGTAATTGTTTCAACTGAGAAACTACGGCATCGACTTCTAGAAGAAGGGGTGAGTGAGCCAGCAATTCAAGACAGTGAGCAAATTATGAGAACCGAGTTTGCAGCCCTGCAAAACCAGCTTGTGCTTCTTAAGCAGAAGCACTCCATACTTATTGATACTTTGCGGCATTTAGAGACAGAAAAGGTTGATCTGGAAAATACAGTAGTTGATGAGAGCCAAAGACAGTGGAATGGTCAAGAGGCTTCCTCTACATTAAGGCAGGAAAAATTGAGTGATGGAACTTTTAGTGACTCTGAGGATGATAATGAGAGACATGATGCTGCAGAGGAGGAAACAGATGATGATGAGAATGCATTTTTTGATACACGCGATTTTCTATCATCCAGTTCTTTCAGAAGTAATGGGTCTGATTATAGATTGTCGTCTTTGTCTTCAGATAGTGAAGGGATCTATGCATTTGAATCTGAGGATGTTGTAGATCCTTCAATTACAACTGCGGTAACCAACTACCCTCGTGTTAAGCGGCGAAAGAAATTGCCTGACCCTGTAGAAAAAGAGAAAGGTGTGAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACCAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTCTCCTCCCTGCAAAAGTGTTGTGAAGAAATGGAATATTCATATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGGTAACAGCCTCATGAGGATTCTCTATGTTGCTGCTTTTGCTGTATCTGGCTATGCATCAACTGAAGGAAGAATTTGCAAGCCATTTAATCCATTACTTGGAGAAACATATGAGGCTAACTTTCCAGATAAAGGCCTTCGTTTTATCTCAGAGAAGGTCAGTCATCACCCTATGATAGTTGCATGTCATTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAGGTTTTCGAGTGGAGCAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGTTGTACTGTGATCACTATGGTACAATGCGTATACAAGGAAACCGAGATTACTCATGTAGACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTGCTGTTCTAGATAGGAATGGAAAAACAGCATCAACTTTGTTTGGGAAATGGGATGAGAGCATGCATTATGTTAATGGAGACTACAGTGGAAAGGGGAAAGGCCTTGAATCATTATCAGAAGCACATTTACTCTGGAAGAGGAGCAAGCCTCCTACAGATCCCACCAGATATAACTTCACTGGCTTTGCCATGACATTAAATGAACTAACCATTGGATTAAAGGAAATATTGCCACCTACTGATTCCAGGTTAAGACCAGACCAGAGGTATTTGGAAAATGGGGAGTTTGAGATGGCAAATTCAGAAAAGTTACGTTTAGAGCAGCAGCAACGTCAGGCTCGGAAGATGCAAGATAGGGGTTGGCAACCACAGTGGTTTTCTATGGATAAAGCGAGTGGAACATACCGCTATATCGGAGGGTATTGGGAGGCCAGACAAGCAGGAAACTGGACCTCCTGTCCTGACATCTTCGGTCAAATTCCTTCGGATCATCTTTCTGATGAAGGTCAAATTACAGCTTCTTAG 2427 0.4372 MHPLCCVSAISDQSSPVKPSPTHFPDFTTTTMPPLPSTAAAIGSDSMPGHSRNHSHGSILSVDYTRLSQREQIQQQQPAVVMEVKINDLVGNGISGVLHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNSETEKGSKVIGEESVRRISRKSNSYFYQHRRKPFGEIHLKVSSIRESKSDDKRFSVFTGTKTVHLRADTREDRVAWMEALQAVKGMFPRMSNSELMAPVDNVIVSTEKLRHRLLEEGVSEPAIQDSEQIMRTEFAALQNQLVLLKQKHSILIDTLRHLETEKVDLENTVVDESQRQWNGQEASSTLRQEKLSDGTFSDSEDDNERHDAAEEETDDDENAFFDTRDFLSSSSFRSNGSDYRLSSLSSDSEGIYAFESEDVVDPSITTAVTNYPRVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDQAYEWGRRGNSLMRILYVAAFAVSGYASTEGRICKPFNPLLGETYEANFPDKGLRFISEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFEWSKVTTSIYNLILGKLYCDHYGTMRIQGNRDYSCRLKFKEQSIIDRNPHQVHGAVLDRNGKTASTLFGKWDESMHYVNGDYSGKGKGLESLSEAHLLWKRSKPPTDPTRYNFTGFAMTLNELTIGLKEILPPTDSRLRPDQRYLENGEFEMANSEKLRLEQQQRQARKMQDRGWQPQWFSMDKASGTYRYIGGYWEARQAGNWTSCPDIFGQIPSDHLSDEGQITAS* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0816 808 MobiDBLite consensus disorder prediction 308 326 - -
Lan15g0816 808 Coils Coil 733 753 - -
Lan15g0816 808 Gene3D - 722 782 - -
Lan15g0816 808 Gene3D - 511 687 - -
Lan15g0816 808 SMART PH_update 92 221 IPR001849 -
Lan15g0816 808 Pfam Pleckstrin homology domain 99 215 - -
Lan15g0816 808 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 63 798 - -
Lan15g0816 808 MobiDBLite consensus disorder prediction 308 354 - -
Lan15g0816 808 SUPERFAMILY PH domain-like 94 219 - -
Lan15g0816 808 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 63 798 IPR000648 GO:0008289
Lan15g0816 808 Coils Coil 289 309 - -
Lan15g0816 808 ProSiteProfiles PH domain profile. 91 219 IPR001849 -
Lan15g0816 808 CDD PH_ORP_plant 94 226 - -
Lan15g0816 808 MobiDBLite consensus disorder prediction 338 353 - -
Lan15g0816 808 Pfam Oxysterol-binding protein 425 779 IPR000648 GO:0008289
Lan15g0816 808 Gene3D - 92 220 IPR011993 -
Lan15g0816 808 SUPERFAMILY Oxysterol-binding protein-like 420 800 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0816 Lan-Chr15 17320166 17327121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0816 K20456 - gmx:100137077 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0816 15 17320166 17327121 Lan14g0623 14 13149025 13155088 LSH