Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0811 ATGGATTTAAACAAAATTCAGATTGCTTTACGAAGCTGCAGGCACTTTCAATCAATCAAAAATGCCAAATCACTCCATTGTTACATAATTAAACATGGCCTTATTAATCATAACTTTCTCCTTAACAACATGATATCTGTTTATGCTAAGTGTTCCCATTTCAACGATGCACAGAACCTTTTCGACGAAATGCCTCATAGAGATATCATTTCGTGGACAACCATGATCTCTGCATTCACCAATTCTGGGAGGCCCCATCAGGCTCTTGCACTCTACAATCACATGTTAGAATCTAAAACAGAACAACAACCCAATCAGTTCTTATACTCTGCGGTTCTCAAGGCATGTGGTCTTGTGGGAAATGTTGGATTGGGCAAGTTGATTCATGATTATATATGTGAAGCTATGTTAGGGTTTGACACTGTTCTGATGAATGCACTATTGGACATGTATGTCAAATGTGGGAACTTGAGGGATGCCCAACAAGTTTTCAATGAAATGTCGCGTAAAAATTTGACTTCGTGGAACACCCTCATTCTGGGGCATGCTAAACTGGGATTGATAGGTGATGCACTGAACTTGTTCGATCAAATGCCAAAGCCAGATATTGTATCTTGGAACAGCATCATTGCTGGTCTTGCAAATAACAATAGTCCCCATGCACTGCAATTTGTTTCAATGATGCATGTGAAGGGTCTTAAACTAGATGAATTTACATTACCCTGTGCTCTCAAAACCTGCAGTTCTCTTGATGAATTAACCACAGGGATACAGATTCATTGTTATGTTATCAAGTCAGGTTTTGAATCTAGCTGTTATTGTTTATCGTCACTGATTGATATGTATTCGAATTGCAAGTTGCTTGATGAAGCAACTGAGATATTTTATCAATTCTTCCGGAACTCTCCTACTGCTGAAAGCTTGGCGCTTTGGAATTCTATGATTTCAGGGCACATTGCCAATGGAGGGTACACCGGGGCTCTCAATTTGATTGCAAATATGCATCTTTCTGGGGCACGTCTTGATTCCTATACCTTTAGCCTTGCTTTAAAGACCTGCATCTACTTCCATAACCTGCAATTAGCATCTCAAGTGCATGGTTTAGTCGTCCCTAGTGGCTATGAGTTAGATTATGTTGTTGGAAGCATCCTTATTGATCTATATGCAAAACAGGGCAACATTGCAAATGCGTTAAGATTGTTTGAAAGGTTGCCAGATAAAGATGTTGTAGCTTGGTCTAGTTTGATTGCTGGCTGTTCTAGAACTGGCCTAAATATGTTAGCTTTTTCCCTCTTTACAGATATGGTTCATTTGGAACTTGAGATTGACCATTTTGTCCTTTCTACTGTTCTGAAAGTTTCTTCAAATTTGGCATCTCTTCGAAGTGGCAAGCAAACTCATGCTTTCTGTCTTAAGAAGGGATATGAATCAGAGAGAGTGATTACAACTGCTCTTATTGATATGTATGCAAAATGTGGTGAGATTGAGGATGCCTTAGGTTTGTTTCATTGTCTTTCAGAAATAGATATGATGTGTTGGACAGGGATCATTGTGGGATGTGCACAAAATGGAAGAGCATATGAGGCGATTAGTCTTCTGCTTAAGATGATAGAAACAGGTACAAAGCCAAATGAAATAACCATTCTAGGTGTTCTTACTGCATGTAGACACACTGGCCTAGTTGAAGAGGCATGGGCCATATTTAATTCTATCGAAACTGAGCACGGATTGATGCCATTACCAGAACATTACAATTGTATGGTTGACATACTTTGTCAAGCAGGACGTTTCGATGAAGCGACAAAACTGATTAGAAGCATGCCATTTAAGCCTGACAAAACTTTATGGTTCTCCTTGCTTGATGCCTGTGGAACTCACAACAACCGATATCTTGCAAATACTGTTGCTATGCATCTTCTTGCTACCTTTCCAGAAGATGCCTCTGTATATATATTGCTCTCAAATTTTTATGCAACTTTTGGAATGTGGGATAGTCAAAGCAAAGTAAGGGAAGCTATGAAAAAAGTAAGTAAAAAAGAAGCTGGAAAAAGCTGGATAGAGATCTTGAGTTAA 2073 0.3903 MDLNKIQIALRSCRHFQSIKNAKSLHCYIIKHGLINHNFLLNNMISVYAKCSHFNDAQNLFDEMPHRDIISWTTMISAFTNSGRPHQALALYNHMLESKTEQQPNQFLYSAVLKACGLVGNVGLGKLIHDYICEAMLGFDTVLMNALLDMYVKCGNLRDAQQVFNEMSRKNLTSWNTLILGHAKLGLIGDALNLFDQMPKPDIVSWNSIIAGLANNNSPHALQFVSMMHVKGLKLDEFTLPCALKTCSSLDELTTGIQIHCYVIKSGFESSCYCLSSLIDMYSNCKLLDEATEIFYQFFRNSPTAESLALWNSMISGHIANGGYTGALNLIANMHLSGARLDSYTFSLALKTCIYFHNLQLASQVHGLVVPSGYELDYVVGSILIDLYAKQGNIANALRLFERLPDKDVVAWSSLIAGCSRTGLNMLAFSLFTDMVHLELEIDHFVLSTVLKVSSNLASLRSGKQTHAFCLKKGYESERVITTALIDMYAKCGEIEDALGLFHCLSEIDMMCWTGIIVGCAQNGRAYEAISLLLKMIETGTKPNEITILGVLTACRHTGLVEEAWAIFNSIETEHGLMPLPEHYNCMVDILCQAGRFDEATKLIRSMPFKPDKTLWFSLLDACGTHNNRYLANTVAMHLLATFPEDASVYILLSNFYATFGMWDSQSKVREAMKKVSKKEAGKSWIEILS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0811 690 Gene3D Tetratricopeptide repeat domain 122 249 IPR011990 GO:0005515
Lan15g0811 690 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 610 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 583 607 IPR002885 -
Lan15g0811 690 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 68 102 IPR002885 -
Lan15g0811 690 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 543 IPR002885 -
Lan15g0811 690 Gene3D Tetratricopeptide repeat domain 364 442 IPR011990 GO:0005515
Lan15g0811 690 PANTHER - 195 435 - -
Lan15g0811 690 PANTHER - 5 199 - -
Lan15g0811 690 PANTHER - 301 688 - -
Lan15g0811 690 TIGRFAM PPR: pentatricopeptide repeat domain 584 607 IPR002885 -
Lan15g0811 690 TIGRFAM PPR: pentatricopeptide repeat domain 174 199 IPR002885 -
Lan15g0811 690 TIGRFAM PPR: pentatricopeptide repeat domain 145 172 IPR002885 -
Lan15g0811 690 TIGRFAM PPR: pentatricopeptide repeat domain 70 99 IPR002885 -
Lan15g0811 690 TIGRFAM PPR: pentatricopeptide repeat domain 512 545 IPR002885 -
Lan15g0811 690 Pfam E motif 626 687 IPR046848 -
Lan15g0811 690 Pfam PPR repeat 311 337 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 512 539 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 174 199 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 382 408 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 483 505 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 143 171 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 410 436 IPR002885 -
Lan15g0811 690 Pfam PPR repeat 275 297 IPR002885 -
Lan15g0811 690 Pfam PPR repeat family 68 116 IPR002885 -
Lan15g0811 690 Gene3D Tetratricopeptide repeat domain 250 361 IPR011990 GO:0005515
Lan15g0811 690 Gene3D Tetratricopeptide repeat domain 2 121 IPR011990 GO:0005515
Lan15g0811 690 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 408 442 IPR002885 -
Lan15g0811 690 Gene3D Tetratricopeptide repeat domain 454 689 IPR011990 GO:0005515
Lan15g0811 690 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 140 174 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0811 Lan-Chr15 17266313 17269899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0811 1 688 Glycoside Hydrolase AT3G49170 30.901 1.94e-116 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0811 - - gmx:100780678 1061.6