Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0804 ATGGCCAAAGACATGAACCTAAGATCTGAAACTCCAATCACTCTGTTCCTGATCTTGTTGTTGTCCTTAACCACTTTTCTGCTCCCTCAAACTGAGGCCATATGGTTAACCATACCAACTTCAGGACCTAAGTGTTTGTCCGAGGAAATCCAGTCACACGTTGTAGTTATAGCTGATTACTATGTTGTGGCTGATGATACTGAGGGTCACCAGCTGAATACTATTTCTGCCAAGGTAACATCTCCTTATGGAAATAATCTTCACGACAATCAAAATGTTACTCACGGTCAGTTTGCATTTACAACTACCGAGAGTGGGAACTATGTGGCGTGCTTTTGGGTTGAAGGTAACCATCAAGGAAGCGTAACTGTTAGCCTTGAATGGAGAACTGGAATTTCTGCCAAGGATTGGGAGGCTGTAGCTAAAAAAGAAAAGATTGAGGGTGTTGAACTTGAGCTAAGGAAGCTTGAAGGAGTTGTGGATGCCATCCATGAGAATCTACTTTACTTGAAGAATAGGGAAGCAGAAATGAGGGAAGTTAGTGAAGCAACAAATGGTAGAGTAGCATGGTTCAGTATCATGTCTCTTGGTGTCTGCATTTCAGTTTCTGGATTGCAACTGTGGTATCTGAAGCGTTTCTTTAGGAAGAAGAAGCTCATATAG 663 0.4208 MAKDMNLRSETPITLFLILLLSLTTFLLPQTEAIWLTIPTSGPKCLSEEIQSHVVVIADYYVVADDTEGHQLNTISAKVTSPYGNNLHDNQNVTHGQFAFTTTESGNYVACFWVEGNHQGSVTVSLEWRTGISAKDWEAVAKKEKIEGVELELRKLEGVVDAIHENLLYLKNREAEMREVSEATNGRVAWFSIMSLGVCISVSGLQLWYLKRFFRKKKLI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0804 220 ProSiteProfiles GOLD domain profile. 43 155 IPR009038 -
Lan15g0804 220 Pfam emp24/gp25L/p24 family/GOLD 35 215 IPR009038 -
Lan15g0804 220 Coils Coil 139 166 - -
Lan15g0804 220 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 13 220 - -
Lan15g0804 220 SMART EMP24_GP25L_2 33 215 IPR009038 -
Lan15g0804 220 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 220 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0804 Lan-Chr15 17199611 17201793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0804 K20352 - gmx:100500676 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0804 15 17199611 17201793 Lan14g0616 14 13019445 13022386 LSH
Lan15g0804 15 17199611 17201793 Lan3g1588 3 27519690 27521777 LSH