Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0790 ATGGCAATTAGGGTTTCGATTTGCTTCCTCTTCTTCGTCTTCGCACTCTCTTTCACTCAGATCTTCGCTGATGAATCCGCGGAAACTAAGGAATTCGTTCTTACATTAGATCACTCTAATTTCTCTGATACCATTACCAAGCACAATTTCATCGTCGTCGAGTTCTATGCACCTTGGTGCGGCCACTGTAAGAACCTTGCCCCGGAGTATGAAAAGGCTGCTTCTATTTTGAGTAGTCATGATCCTCCAATTGCTTTGGCTAAAGTTGATGCCAACGAGGAAAAGAACAAAGACCTTGCCTCTCAATATGATGTTAAAGGTTTCCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATATTCAAGACTACAAAGGTCCTCGTCAAGCAGATGGTATTGCTGACTATCTGAAGAAACAAAGCGGACCAGCATCTTCAGAAATTAAATCTGCCGATGATGCTAGTGCTTTAATTGGTGAAAATAAAATTGCTATTGTTGGGATTTTTCCTAAATTTTCTGGGGAGGAGTTTGACAACTTTATTGCAGTAGCAGAGAAGTTACGTTCTGAATATGACTTTGGGCACACCCTGGATGCCAAACACCTTCCACGGGGTGAATCGTCGGTTTCTGGGCCTGCAGTTAGGTTATTCAAGCCATTTGATGAGCTTTTTGTTAACTCCCAGGATTTCCATGTGGAAGCTCTAGAGAAATTTGTTGAAGAATCTAGTAGCCCTCTTGTGACTGTCTTTAACAACGATCCAAGCAATCACCCTTATGTTGTTAAATTCTTTAACAGTCCCCATGCAAAGGCAATGTTGTTCGTCAACTTCACTGCTGAAGGTGTTGAATCTTTGAAATCAAAATACCGTGAAGCTGCTGCGCTATATCAGAAAGAGGGCATAAGCTTTTTGGTGGGAGATGTTGAGGCTAGTCAAAATGCCTTCCAGTATTTCGGACTTCAGGAAGACCAAGTACCTCTAATTATCATACAACAAAATGATGGGAAGAAATTTCTTAAACCCCATTTGGAGGCTGAGCACATTTCTACTTGGTTGAAGGAATACAAGGATGGAAAGGTTGCACCACATGTGAAGTCTGAGCCTATTCCAGAATCAAACAATGAACCTGTTAAGGTAGTAGTTGGGAAGAGTCTTCAGGACATAGTTTTCAACTCTGGAAAGAATGTTTTGCTAGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGAGGAAGTTGCTATCTCATATCAAAGTGATGCTGATATTATTATTGCAAAACTGGATGCAACTGCCAATGATGTCCCAAGTGAAACCTTTGAAGTCCAAGGTTATCCAACTTTGTACTTCAGATCAGCAAGTGGAAAGTTGGCACAATACGATGGCGGTAGGGCCAAGGAAGACATCATAGAATTTATTGAAAAGAGCCGTGATAAACCCGCTCAGCAAGAAAAAGTGAAAGAACAATCAGAAGAGAAACCTGCCCAGCAAGAACAGGGAAAAGATGAGCTTTAA 1530 0.4137 MAIRVSICFLFFVFALSFTQIFADESAETKEFVLTLDHSNFSDTITKHNFIVVEFYAPWCGHCKNLAPEYEKAASILSSHDPPIALAKVDANEEKNKDLASQYDVKGFPTIKILRNGGKNIQDYKGPRQADGIADYLKKQSGPASSEIKSADDASALIGENKIAIVGIFPKFSGEEFDNFIAVAEKLRSEYDFGHTLDAKHLPRGESSVSGPAVRLFKPFDELFVNSQDFHVEALEKFVEESSSPLVTVFNNDPSNHPYVVKFFNSPHAKAMLFVNFTAEGVESLKSKYREAAALYQKEGISFLVGDVEASQNAFQYFGLQEDQVPLIIIQQNDGKKFLKPHLEAEHISTWLKEYKDGKVAPHVKSEPIPESNNEPVKVVVGKSLQDIVFNSGKNVLLEFYAPWCGHCKQLAPILEEVAISYQSDADIIIAKLDATANDVPSETFEVQGYPTLYFRSASGKLAQYDGGRAKEDIIEFIEKSRDKPAQQEKVKEQSEEKPAQQEQGKDEL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0790 509 SUPERFAMILY Thioredoxin-like 343 481 IPR036249 -
Lan15g0790 509 CDD PDI_a_family 34 137 - -
Lan15g0790 509 PANTHER PROTEIN DISULFIDE ISOMERASE 4 496 - -
Lan15g0790 509 Gene3D Glutaredoxin 371 485 - -
Lan15g0790 509 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Lan15g0790 509 Gene3D Glutaredoxin 246 370 - -
Lan15g0790 509 ProSitePatterns Thioredoxin family active site. 397 415 IPR017937 -
Lan15g0790 509 CDD PDI_b'_family 259 356 - -
Lan15g0790 509 ProSiteProfiles Thioredoxin domain profile. 16 142 IPR013766 -
Lan15g0790 509 SUPERFAMILY Thioredoxin-like 243 374 IPR036249 -
Lan15g0790 509 MobiDBLite consensus disorder prediction 480 509 - -
Lan15g0790 509 PRINTS Thioredoxin family signature 51 59 - -
Lan15g0790 509 PRINTS Thioredoxin family signature 59 68 - -
Lan15g0790 509 PRINTS Thioredoxin family signature 104 115 - -
Lan15g0790 509 SUPERFAMILY Thioredoxin-like 33 143 IPR036249 -
Lan15g0790 509 TIGRFAM ER_PDI_fam: protein disulfide isomerase 33 509 IPR005792 GO:0003756
Lan15g0790 509 Gene3D Glutaredoxin 141 245 - -
Lan15g0790 509 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 496 - -
Lan15g0790 509 TIGRFAM pdi_dom: protein disulfide-isomerase domain 37 140 IPR005788 GO:0003756
Lan15g0790 509 TIGRFAM pdi_dom: protein disulfide-isomerase domain 381 480 IPR005788 GO:0003756
Lan15g0790 509 ProSiteProfiles Thioredoxin domain profile. 355 483 IPR013766 -
Lan15g0790 509 Pfam Thioredoxin-like domain 169 353 - -
Lan15g0790 509 SUPERFAMILY Thioredoxin-like 146 245 IPR036249 -
Lan15g0790 509 CDD PDI_b_family 145 241 - -
Lan15g0790 509 Pfam Thioredoxin 33 139 IPR013766 -
Lan15g0790 509 Pfam Thioredoxin 377 480 IPR013766 -
Lan15g0790 509 CDD PDI_a_PDI_a'_C 376 478 - -
Lan15g0790 509 Gene3D Glutaredoxin 20 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0790 Lan-Chr15 17050684 17054665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0790 K09580 - gmx:100170705 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0790 15 17050684 17054665 Lan14g0599 14 12795236 12799238 LSH