Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0784 ATGACGGTGAAGGTGTTGGTGGAGTGGTGGCGGTGGTGTTCTTCCATTGCACTTATTTTAACGGTGGTTTTTGGCACTGTCCACGGTGGAAATGTCAGCTACGATGGAAGATCATTAATCATTAATGGCGAACATAAAATCCTCTTCTTTGGTTCAATTCACTATCCTCGTAGCACTCCTGAGATGTGGCCTGATTTAATTGCAAAAGCTAAGGAAGGAGGATTAGATGGCATTCAAACTTATGTGTTTTGGAACCTTCACGAGCCTCAACAAGGCCAGTATGACTTTAGTGGAGGGCGTGATTTAGTTAAGTTCATTAAGGAAATTCAAGCACAAGGTTTATATGTCACCCTTCGGATAGGACCATTCATTGAGAGTGAATGGACTTATGGGGGTCTACCAATATGGTTACATGACATTCCTGGCATTGTTTTTAGATCTGATAATGAGCCATTCAAGTATCACATGCAAAACTTCACTACCAAAATAGTTGATATGATGAAATCAGCTAAACTTTTTGCTTCACAAGGAGGGCCTATCATAGCATCTCAGATTGAAAATGAATATGGGAATGTTCAAAGATCATTTCATAAGAATGAATGGTCCTATGTTAAATGGGCTGCAAATATGGCATTGGGACTCAAAACTGGTGTCCCTTGGATAATGTGCAAGCAAGATGATGCTCCTGGTGAAGTGATCAACACTTGCAATGGTATGCAGTGTGGGACAACATTTAAGGGACCAAACTCGCCTAACAAACCTTCAATGTGGACAGAGAATTGGACAAGTTTCTACCAAGCCTTCGGTGGAGAACCATACTTGAGATCAGCTCAAAATATTGCATATAATGTTGCCTTATTCATCGTCGCAAAGAAAGGAAGCTATGTAAATTACTACATGTTCCATGGAGGAACAAATTTCGACAGACTAGCCTCGGCATTCATAACAACAGCTTATTATGATGAAGCTCCACTTGATGAATATGGTTTGGCTAAGGAACCAAAATGGAGTCATCTTAAGCAACTACATGCTGCAGTCAAGTCATGTTCAGAATCTTTACTTTATGGAACTCAAACTATAGTCAACTTGGGTAAACAACAAAATGCTTATGTTTTCAAAAGGGACTCAAGAGGATGTGCTGCGTTCCTCGAAAATAGCGATGCTAAGGGAGTAACAATCCAATTTCAAAATCATCCATATCATTTACCCCCAAAATCAATCAGTATTCTACCAGATTGTAAGACTGTAGTCTTCAACACTGCCAAGGTAAGCGTAAAAACCAAAGCCAGAATAATGAAACCACAGTTCCAATTCAATTCAGCTGAAAAATGGAAATTGTACAAAGAACCCATCCCGAACTTCGACGATACTTCATCAAGAGAAAATAAACTATTAGATCAAATCAGCAAAGCAAAAGATACAAGTGACTATCTATGGTACACTTTCAGGTTTAATGACAAATCCGGTAATGCTCACTCTGTTCTTAGAGCAGACAGCCAAGGACATGTTTTGCATGCATTCGTCAACGGAGTTTTAGTAGGTTCTGCTCATGGAAATCACAAGAATGTATCTTTCATTATGGAGAAGAATGTCCATCTGATATGGGGGAGGATGAACAACATTTCCTTCCTGAGTGCAACTGTTGGATTGCCGAACTCAGGAGCATTCCTAGAGCGCAGAGTTGCTGGTTTGAGTGCAGTTAAAGTTCAAGGAAGAGATTTCACACATCAACCATGGGGATATCAGGTGGGGTTGTTAGGAGAAAAGTTGCAAATCTACACAGCTAGTGGATCAAGTAAAGTTCAGTGGGAAAGTTTTCAAAAATCTACTACACCACTAACATGGTATCAGACCACATTTGATGCACCAGTTGGCAAAGATCCTGTAGCTCTTAACCTTGGTTCTATGGGAAAGGGACAAGCTTGGATTAATGGCCAAGGTATTGGTCGATATTGGGTATCTTTCCACTCACAAAAGGGGACTCCTTCACAAAAATGGTATCACATACCTCGATCATTCCTAAAACCTAAAGAGAATCTACTAGTTCTACACGAAGAAGAAAGTGGGAACCCACTAGCGATCACTCTAGACACAGTCACATATGAATAA 2109 0.4021 MTVKVLVEWWRWCSSIALILTVVFGTVHGGNVSYDGRSLIINGEHKILFFGSIHYPRSTPEMWPDLIAKAKEGGLDGIQTYVFWNLHEPQQGQYDFSGGRDLVKFIKEIQAQGLYVTLRIGPFIESEWTYGGLPIWLHDIPGIVFRSDNEPFKYHMQNFTTKIVDMMKSAKLFASQGGPIIASQIENEYGNVQRSFHKNEWSYVKWAANMALGLKTGVPWIMCKQDDAPGEVINTCNGMQCGTTFKGPNSPNKPSMWTENWTSFYQAFGGEPYLRSAQNIAYNVALFIVAKKGSYVNYYMFHGGTNFDRLASAFITTAYYDEAPLDEYGLAKEPKWSHLKQLHAAVKSCSESLLYGTQTIVNLGKQQNAYVFKRDSRGCAAFLENSDAKGVTIQFQNHPYHLPPKSISILPDCKTVVFNTAKVSVKTKARIMKPQFQFNSAEKWKLYKEPIPNFDDTSSRENKLLDQISKAKDTSDYLWYTFRFNDKSGNAHSVLRADSQGHVLHAFVNGVLVGSAHGNHKNVSFIMEKNVHLIWGRMNNISFLSATVGLPNSGAFLERRVAGLSAVKVQGRDFTHQPWGYQVGLLGEKLQIYTASGSSKVQWESFQKSTTPLTWYQTTFDAPVGKDPVALNLGSMGKGQAWINGQGIGRYWVSFHSQKGTPSQKWYHIPRSFLKPKENLLVLHEEESGNPLAITLDTVTYE* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0784 702 PANTHER BETA-GALACTOSIDASE 14 700 - -
Lan15g0784 702 Pfam Glycosyl hydrolases family 35 38 345 IPR031330 -
Lan15g0784 702 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Lan15g0784 702 Gene3D - 577 701 - -
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Lan15g0784 702 SUPERFAMILY (Trans)glycosidases 29 349 IPR017853 -
Lan15g0784 702 Pfam Beta-sandwich domain in beta galactosidase 353 423 IPR041392 -
Lan15g0784 702 Gene3D Glycosidases 30 350 - -
Lan15g0784 702 SUPERFAMILY Galactose-binding domain-like 578 699 IPR008979 -
Lan15g0784 702 SUPERFAMILY Galactose-binding domain-like 407 561 IPR008979 -
Lan15g0784 702 PANTHER BETA-GALACTOSIDASE RELATED 14 700 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0784 Lan-Chr15 16967506 16976675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0784 7 700 Glycoside Hydrolase AT5G63800 58.533 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0784 - - pvu:PHAVU_009G127500g 1127.85