Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0758 ATGACGACGGCGCAACCAACAATCGACTTACCAGAATGCCCCGTTTGCCTCGAAACTTACAACGACACCGTTTCAATCCCTCGCGTACTATCTTGCGGTCACTCAATCTGCGAAGCTTGCCTCGTTTCACTCCCACAGCGATACCCTAACACGATTCGATGCCCTGCGTGTACTCAATTACTAAAATACCCTTCCGATCAAGGTCCTTCTTCTCTTCCCAAAAACATCGACCTTCTTCGAATCTCTCTCCAACAGTCTCCTCCTTCTTCAGAATCCGATCATTACAAAAAGCAAAATCAACGGTCCACAATCAATGTCGCTAAATTCTGGTCGGATGAGTTCTATGCCACGTGGAAGGATTGGATTCTCCCGGTCGACGCCGTTTTGGTTGAACCCGAATCCGAACCCGAACCGGGTGGTTTTGTGCGATTCGGTTCGTTGAATTATTCTAGGGTTTGTTTCAGAGGTGATAACAATGGTAACGGTTTGAGTCTTGTTCCTGTTGTTTCTTTACCGTCTATTGTGAATGATTCGAAGTTTAGGTTTAGTTATGTTGCGAGGATTATTAAGTGTTTGGAGGGAATGAAAGAGGTTGAGAGGGAGGGATTAATTTTGATTCTGGAAGCTTCCGAGAGACGGCGTAAGAGGATGTGTAGGGTTTATGGGTTGTGGAGTGAGGTGGAGGAGGTGGATGATGCGGCTTTATATATTGTGTGTGAGAGGCACAATGGTAGTAATCTTTTGGACAAGTTCAGTGACTTGAGAAATGGGTTTCTTGAAGATGGGTTTTTTAGTTTTGCAATGATTGGTAAGGGTATCTGTGAATCTGTGCTTGCTTTGCATTCGGAAGGTTTGGTTGCTGGCTGTTTAGGACTTTCTTGTTTTTATTATGACGAGTTTGGTGGTGTTTGTATTGATTTGAATGAAGCATTGGTGATGGGAAGGAAGGTTTGTTCTAATGTTATGGATACTGTTTCCGGTGCCACGAGCAGTAAACACAAGGAAGACAAAGCAATATGTAAGGATTGGTTGAAAAGTAAGGTTTTCGTTAGCCCAGAGGTTATGCTTAGGTTATTGCATAAGGAGGATATTTCTCGTGAGAATGGGCATTCAAGATATCCAATTGGTTATGGCTCAGATATATGGTCATTGGCTTGTGTAGTGCTGCTGCTTCTTGTTGGAGATGCATTCCCTCAATATACTTTTCAAATGAATGAAGAGAATGACTTTGATTACTCAGATGGTTACGCTTGTTGGTTGGAGGAAGTTAATTCAGTTATAGATGACAAACTAGGGCCTCAATATCTATCGTCGAGGCAGACTCTTTGCAAATGTTTGGACATAAATCCAGGAAACCGTCCAGATGTGGTGGATGTAAGGAAATGCATTCAGGATATGTTAGTCAAACCTCAATTTGATTTTCTGGGCAACTTGGAGGTCACAATAAACAAGAGCAGCATGAATCACTGCTTGATTCTTGGGGAGTTGTTTCAGTTCCACAGGGACAGTTCTAATGAACAGAGAGAATGTGAGTTGCAGGACAACGAAGATAGAGATCAACCAGATTTTGTTGGAGATGGTGAAGACAATTCTGACGAAGATTTTGTTGCTGGCCTATATAAGGGAATGACTGAATTTAATGATCTGCGAGGACATCTGGATTGTATCACTGGATTGGCTGTTGGGGGGGGGTATTTGTTTAGCTCATCATTCGATAAAACTGTCCATGTATGGTCCTTACAGGATTTTTCTCATTTACACACATTTAGAGGTCATGAGAATAAAGTCATGGCTCTAGTTTGTGTGGATGAAGAAGAACCGTTGTGCGTAAGTGGTGACAGTGGAGGCGGCATATTTGTCTGGGGAATTACTAGCCCTCTCAGGCAAGATCCCTTGAGTAAATGGTATGAGCAGAAGGATTGGCGTTTTAGTGGTATCCATTCCATGACTGCTTACAGAAATCATCGTCTCTACACGGGAAGTGGAGATAGAACAATAAAAGCTTGGTCATTAAAGGACGGATCTTTGATTTGCACAATGAATGGCCATAGTTCTGTAGTTTCCAAACTTGCAATATGTGATGAGGTTCTATACAGTGGTAGTTGGGATGGAACTGTTCGGTTGTGGAGTCTTAATGATCACAGCCAATTGACAGTGCTTGGGGAAGATATGCCCAGAGAGGTGAAGTCTGTCCTGGCAATTACTGTCAATAGGCAGTTGCTTGTTGCTGGTTATGAGAACGGATGCATAAAGGTCTGGAGCAATGACGTGTTCATGAATTCCAAGACATTGCATGATGGTGCTATTTTTGCTATGGATATGCAGGGAAAATGTCTTTATACAGGAGGTTGGGATAAAACTGTTAATATACAGGAATTATCAGGAGATGATGAGTTTGAACTAGATGTCAAAGCATTTGGTTCCATTCCTTGCAGTTCTGTTGTAACAGCTCTATTATGTTGCCAAGGGAAACTTATTGTTGGATATGCTGATAAGTCTATCAAGGAAAATGTTGGCCTTTTTCGAAAGAGTCTCACTGATTTTACCAGCTTGAACTACTGGGTTGTTCGTGACTACTACCGTCTTGTTAATTCTGTCAATGGGTTCGAGCTGCGGATTCAGGCACTCTCGGATGAGCAGTTAACTAAGAAAACACAAGAGTTTCGCCTCCGTCTCGGGAAAGGGGAGACTCTTGCAGATATTCAAGCTGAGGCATTTGCTGTGGTACGTGAAGCTGCTAGAAGAAAACTCGGAATGCGCCACTTTGATGTCCAGATTATTGGGGGAGCAGTGTTGCATGATGGGTCCATTGCCGAGATGAAAACAGGCGAGGGAAAGACATTAGTTTCCACATTAGCTGCATATCTTAATGCCCTGACCGGTGAGGGTGTCCATGTTGTAACTGTCAATGATTATTTAGCTCAACGTGATGCTGAATGGATGGGGCGTGTTCATCGCTTCTTAGGTCTTTCTGTTGGTCTTATTCAGAGGGGGATGGACTCTGAAGAGAGGAGATTCAACTACAGATGTGATATAACATATACCAATAATTCGGAGCTTGGCTTTGATTACTTACGAGATAATCTTGCTGGAAGTAGCGATCGACTTGTGATGAGATGGCCAAAGCCATTTCATTTTGCGATTGTTGATGAAGTGGATTCTGTCCTGATAGATGAAGGAAGGAATCCTTTGTTAATCAGCGGTGAAGCTACTGAAGATGCTGCACGATACCCTGTTGCTGCAAAAGTAGCTGAATTGCTTATGCAGGGAAGACATTACAAAGTGGAGCTTAAAGATAATTCGGTAGAGTTGTCTGAGGAAGGAATTGCTCTTGCTGAAATGGCTCTTGAAACTAATGACCTTTGGGATGAAAATGATCCCTGGGCTAGATTTGTGATTAATGCGTTGAAAGCTAAGGAATTCTATCGCCAAGATGTTCAGTACATTGTGAGAGATGGAAAGGCTTTAATTATCAATGAGCTGACGGGAAGAGTTGAAGAGAAAAGGAGATGGTCTGAGGGCATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTGGAGATTCAGGCAGATTCGGTTGTTGTGGCACAAATCACATATCAGTCATTATTCAAGCTTTACCCAAAGTTGTCAGGAATGACTGGGACTGCAAAAACAGAAGAGAAAGAGTTCTTAAAAATGTTCCAGGTGCCAGTCATCGAAGTCCCCACAAATCTTTCTAATATCCGGAAAGATTTGCCTATTCAAGCTTTTGCTACTGCTCGTGGGAAATGGGAGCAAGTTCGCAGAGAAGCTGAATATATGTTTAAACAAGGTCGTCCTATCTTAGTTGGGACGACTAGTGTAGAAAATTCTGAACTTTTGTCTGGTCTGCTTAGGGAATGGGATATTCCTCACAATGTCCTGAATGCTCGACCCAAGTATGCTGCAAGAGAAGCCCAAATTGTTGCACAAGCAGGACGGAAACACGCCATTACCATCTCTACAAATATGGCAGGCAGGGGCACAGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGAGAAATTATAGAGGATAGCATACTTTCATTTCTAACACAAGAGGATCCAAATATTGACCTTGCTGGTGAGGCTGTTTCAGAAAAGGCGCTTTCAAAAATAAAAGTTGGATCATCATCATTGGCCTTGCTGGCAAAGACAGCCTTAATGGCCAAATATGTTTCCAAAAGTGAGGCTAAAAGTTGGACGTATCAATATGCTAAATCTTTCATCTTGGAGGCCATTGAAATGAGTATGTCACATAGTTTGGAGGAGCTGGAGAAGCTTGCTAATGAAGAATCTGAGATGTACCCTCTTGGTCCAACTGTTGCACTTGCGTACCTGTCAGTTCTGAAAGATTGTGAAGAACACTGTTTGCATGAAGGGTCTGAGGTAAAAAGACTTGGAGGCCTTCATGTGATTGGAACTTCTTTGCATGAGTCCCGGAGAATAGATAACCAGCTCCGTGGCAGAGCAGGAAGGCAGGGGGATCCAGGATCAACAAGATTTATGGTCAGCTTGCAGGATGAGATGTTTCGCAAGTTCAATTTTGATACTGAATGGGCTGTGAGACTTATCTCAAAAATTACAAATGACGAGGATATGCCAATTGAGGGTGATGCCATTGTAAAGCAGCTCCTGGGATTGCAAATCAATGCAGAAAAGTTCTTCTTCGGCATAAGAAAGAACCTTGTTGAGTTTGATGAAGTATTGGAGGTGCAAAGAAAGCATGTTTATGATCTAAGGCAGTTAATCTTAACAGGAGATGACGAAAGCTGTTCCCAACATATATTCAAGTATATGCAAGCAGTGGTGGATGAGATTGTCTTAAGTAATATTGATCCAATGAAGCATCCACATAGCTGGAGTTTGAGTAAGCTCTTGAAAGAGTTCATGACAGTTGGTGGAAAGTTGTTGCATGAATCTTTTGGTGGGATTACAGATGACAATTTGCTAAAATCACTTGGGCAGTTGCATGACATAAGTTCTCTTGATATTGTCTACTTTTCTCTTCCAAACTTGCCAGCACCTCCAAATGCCTTTAGGGGAATTCGCAGGAAAAGCTCGTCATTAAGACGATGGCTTACTATTTGCTCCGATGATTTAATTGAGAATGGGAAGTACCGGACAACTTCTAATCTCCTTCGCAAGTACCTTGGAGATTTTCTCATTGCTTCATATTTAAATGTTGTTGAAGAGTCTGGTTATGATGAGAAACATGTAAAGGAAATTGAGAGAGCTGTTCTTTTGAAAACTCTTGATTGTTTCTGGAGAGATCATCTTGTAAACATGAATAGGCTCAGCTCTGCGGTTAATGTAAGGAGCTTCGGCCATAGAAATCCTCTTGAAGAGTACAAAATCGATGGTTGTCGGTTTTTCATTTCAATGCTTAGTGCAACTCGAAGGGTAACTGTAGAATCACTGCTGCAGCATTGGACATCTCCAATGGAATCTGAAGAACTATATTCATCATAA 5496 0.4219 MTTAQPTIDLPECPVCLETYNDTVSIPRVLSCGHSICEACLVSLPQRYPNTIRCPACTQLLKYPSDQGPSSLPKNIDLLRISLQQSPPSSESDHYKKQNQRSTINVAKFWSDEFYATWKDWILPVDAVLVEPESEPEPGGFVRFGSLNYSRVCFRGDNNGNGLSLVPVVSLPSIVNDSKFRFSYVARIIKCLEGMKEVEREGLILILEASERRRKRMCRVYGLWSEVEEVDDAALYIVCERHNGSNLLDKFSDLRNGFLEDGFFSFAMIGKGICESVLALHSEGLVAGCLGLSCFYYDEFGGVCIDLNEALVMGRKVCSNVMDTVSGATSSKHKEDKAICKDWLKSKVFVSPEVMLRLLHKEDISRENGHSRYPIGYGSDIWSLACVVLLLLVGDAFPQYTFQMNEENDFDYSDGYACWLEEVNSVIDDKLGPQYLSSRQTLCKCLDINPGNRPDVVDVRKCIQDMLVKPQFDFLGNLEVTINKSSMNHCLILGELFQFHRDSSNEQRECELQDNEDRDQPDFVGDGEDNSDEDFVAGLYKGMTEFNDLRGHLDCITGLAVGGGYLFSSSFDKTVHVWSLQDFSHLHTFRGHENKVMALVCVDEEEPLCVSGDSGGGIFVWGITSPLRQDPLSKWYEQKDWRFSGIHSMTAYRNHRLYTGSGDRTIKAWSLKDGSLICTMNGHSSVVSKLAICDEVLYSGSWDGTVRLWSLNDHSQLTVLGEDMPREVKSVLAITVNRQLLVAGYENGCIKVWSNDVFMNSKTLHDGAIFAMDMQGKCLYTGGWDKTVNIQELSGDDEFELDVKAFGSIPCSSVVTALLCCQGKLIVGYADKSIKENVGLFRKSLTDFTSLNYWVVRDYYRLVNSVNGFELRIQALSDEQLTKKTQEFRLRLGKGETLADIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMDSEERRFNYRCDITYTNNSELGFDYLRDNLAGSSDRLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEATEDAARYPVAAKVAELLMQGRHYKVELKDNSVELSEEGIALAEMALETNDLWDENDPWARFVINALKAKEFYRQDVQYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLEIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQVPVIEVPTNLSNIRKDLPIQAFATARGKWEQVRREAEYMFKQGRPILVGTTSVENSELLSGLLREWDIPHNVLNARPKYAAREAQIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAREIIEDSILSFLTQEDPNIDLAGEAVSEKALSKIKVGSSSLALLAKTALMAKYVSKSEAKSWTYQYAKSFILEAIEMSMSHSLEELEKLANEESEMYPLGPTVALAYLSVLKDCEEHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNFDTEWAVRLISKITNDEDMPIEGDAIVKQLLGLQINAEKFFFGIRKNLVEFDEVLEVQRKHVYDLRQLILTGDDESCSQHIFKYMQAVVDEIVLSNIDPMKHPHSWSLSKLLKEFMTVGGKLLHESFGGITDDNLLKSLGQLHDISSLDIVYFSLPNLPAPPNAFRGIRRKSSSLRRWLTICSDDLIENGKYRTTSNLLRKYLGDFLIASYLNVVEESGYDEKHVKEIERAVLLKTLDCFWRDHLVNMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRVTVESLLQHWTSPMESEELYSS* 1832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0758 1831 PANTHER PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC 844 1829 - -
Lan15g0758 1831 SMART ring_2 13 57 IPR001841 -
Lan15g0758 1831 ProSiteProfiles Trp-Asp (WD) repeats profile. 549 588 IPR001680 GO:0005515
Lan15g0758 1831 Gene3D - 540 634 IPR015943 GO:0005515
Lan15g0758 1831 SUPERFAMILY Helical scaffold and wing domains of SecA 1716 1828 IPR036266 -
Lan15g0758 1831 Pfam SecA Wing and Scaffold domain 1543 1817 IPR011116 GO:0016020|GO:0017038
Lan15g0758 1831 ProSitePatterns Zinc finger RING-type signature. 32 41 IPR017907 -
Lan15g0758 1831 ProSiteProfiles Zinc finger RING-type profile. 13 58 IPR001841 -
Lan15g0758 1831 Gene3D - 860 1237 IPR027417 -
Lan15g0758 1831 Pfam SecA preprotein cross-linking domain 1076 1180 IPR011130 GO:0016020|GO:0017038
Lan15g0758 1831 CDD SF2_C_secA 1242 1513 IPR044722 -
Lan15g0758 1831 SMART SecA_DEAD_2 845 1224 IPR011115 GO:0005524|GO:0016020|GO:0017038
Lan15g0758 1831 SUPERFAMILY Pre-protein crosslinking domain of SecA 1068 1189 IPR036670 GO:0016020|GO:0017038
Lan15g0758 1831 SMART serkin_6 173 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0758 1831 Gene3D Helical scaffold and wing domains of SecA 1548 1656 - -
Lan15g0758 1831 CDD DEXDc_SecA 880 1236 - -
Lan15g0758 1831 SMART WD40_4 721 754 IPR001680 GO:0005515
Lan15g0758 1831 SMART WD40_4 628 670 IPR001680 GO:0005515
Lan15g0758 1831 SMART WD40_4 673 710 IPR001680 GO:0005515
Lan15g0758 1831 SMART WD40_4 582 622 IPR001680 GO:0005515
Lan15g0758 1831 SMART WD40_4 755 792 IPR001680 GO:0005515
Lan15g0758 1831 SMART WD40_4 542 579 IPR001680 GO:0005515
Lan15g0758 1831 Pfam RING-type zinc-finger 13 55 IPR027370 -
Lan15g0758 1831 CDD RING-HC_TRIM32_C-VII 12 58 - -
Lan15g0758 1831 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 680 712 - -
Lan15g0758 1831 Coils Coil 1419 1439 - -
Lan15g0758 1831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1241 1526 IPR027417 -
Lan15g0758 1831 ProSiteProfiles SecA family profile. 841 1545 IPR014018 -
Lan15g0758 1831 Gene3D Helical scaffold and wing domains of SecA 1686 1821 - -
Lan15g0758 1831 Hamap Protein translocase subunit SecA [secA]. 840 1821 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 SUPERFAMILY WD40 repeat-like 545 835 IPR036322 GO:0005515
Lan15g0758 1831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 94 IPR013083 -
Lan15g0758 1831 ProSiteProfiles Protein kinase domain profile. 149 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0758 1831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 1237 IPR027417 -
Lan15g0758 1831 SUPERFAMILY Protein kinase-like (PK-like) 189 471 IPR011009 -
Lan15g0758 1831 SMART SecA_PP_bind_2 1069 1180 IPR011130 GO:0016020|GO:0017038
Lan15g0758 1831 Gene3D - 640 836 IPR015943 GO:0005515
Lan15g0758 1831 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 927 1090 IPR014001 -
Lan15g0758 1831 PRINTS SecA protein signature 901 925 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 939 953 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 955 965 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 1008 1028 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 1161 1183 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 1198 1215 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS SecA protein signature 1235 1248 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 TIGRFAM secA: preprotein translocase, SecA subunit 866 1638 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 Gene3D - 1240 1545 IPR027417 -
Lan15g0758 1831 Gene3D Transferase(Phosphotransferase) domain 1 208 468 - -
Lan15g0758 1831 SUPERFAMILY RING/U-box 11 65 - -
Lan15g0758 1831 ProSiteProfiles Trp-Asp (WD) repeats profile. 680 719 IPR001680 GO:0005515
Lan15g0758 1831 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 844 1829 IPR000185 GO:0005524|GO:0006605|GO:0006886
Lan15g0758 1831 PRINTS G protein beta WD-40 repeat signature 566 580 IPR020472 -
Lan15g0758 1831 PRINTS G protein beta WD-40 repeat signature 657 671 IPR020472 -
Lan15g0758 1831 PRINTS G protein beta WD-40 repeat signature 697 711 IPR020472 -
Lan15g0758 1831 Pfam SecA DEAD-like domain 856 1223 IPR011115 GO:0005524|GO:0016020|GO:0017038
Lan15g0758 1831 ProSitePatterns SecA family signature. 1324 1339 IPR020937 GO:0006605|GO:0006886|GO:0016020
Lan15g0758 1831 Gene3D - 1070 1190 - -
Lan15g0758 1831 MobiDBLite consensus disorder prediction 509 531 - -
Lan15g0758 1831 SUPERFAMILY Helical scaffold and wing domains of SecA 1549 1647 IPR036266 -
Lan15g0758 1831 Pfam WD domain, G-beta repeat 676 710 IPR001680 GO:0005515
Lan15g0758 1831 Pfam WD domain, G-beta repeat 548 579 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0758 Lan-Chr15 16684438 16696800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0758 564 802 Acyl Lipid Metabolism Gene Families AT3G18860 26.587 1.72e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0758 K03070 - gmx:100793437 2888.21