Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0743 ATGGCAGCACAAAATTTGGGAAGGTCCAAAACCCTAATCCAAAAAAATCTGCTTTTTTTGTTGGGATCAGTTGTTAACAAAAGTACTTTTTCACCTTCTACCTTTCAATCTGGTGGTGTTAATCCATTTGTTAAGTGCTATCATGCTCCACCACATGCATCATTACTAGGTAATAACCCAGATTCCCTCTTCTGCTTCTCACGTTTTGAATCCACCAAAGCTGAGGCTCGATTGAATTTTCAGAACTATGTCTCCGAGGATGAAGATAATAATCAGGGTATTGATTTTCCTGGTGGGAAAGTAGCATTCACTTCTGAAATGAGATTCATTTCTGATTCTGATCACAAAAGGGTACCTTGTTATAGAGTTCTTGATGACAATGGAGAGATAATGAAATTCAGCAATTATGTACAGGTAAACAAGGAAATGGCTGTGAAGATGTATTCAAACATGGTAACTCTTCAAACTATGGACATAATATTCTATGAAGTACAAAGGCAAGGGAGAATTACATTCTATGTTACCTGTGCTGGAGAAGAAGCAGTTAACATTGCATCAGCAGCTGCACTTGCATTTGATGATATTATATTGCCTCAGTACCGCGAGCCTGGAGTTCTATTGTGGCGCGGTTTTACACTACAACAATTTGCTGATCAGTGCTTTGGAAACACAAGTGATTTTGGAAGAGGCAGACAGATGCCTATACACTACGGGTCGAACGAGCACAATTACTTCACAGTGTCATCTCCTATTGCGACACAACTTCCTCAAGCTGTTGGCGCTGCTTATTCGCTAAAAATGGATGGGAAAAGTGCATGTGCGGTCACTTATTGTGGGGATGGTAGCACCAGTGAGGGAGATTTCCATGCTGCATTGAATTTTGCAGCAGTAATGGAGGCACCTGTTATTTTCATCTGTCGCAACAACGGATGGGCCATCAGTACCCCAGTCGAAGAACAATTTCGAAGTGATGGTGTTGTAGTTAAAGGTCAAGCTTATGGAATCAAGAGTATTAGAGTAGACGGAAATGATGCTCTTGCGGTCTATAGCGCAGTTCATACCGCTCGTGAGATGGCTATAAGAGAAAAAAGACCAGTCTTAATTGAGGCTCTCACTTATAGAGTAGGACACCACTCTACATCAGATGATTCAACTAAGTACAGGCCAAATGACGAGATTGAATATTGGAAAATGGCGAGAAATCCGGTGAATAAATTCAAAAGATGGGTGGAAAGGAATGGTTGGTGGAGTGACAAGGATGAAATGGAGGTTAGAAGCAGCGTCAGGAAGCAGTTATTGGAAGCAATTAAGTTGGCTGAGAAAGAACAGAAACCTCCACTTGAGGACATGTTCAATGATGTCTATGACCAACTGCCATCAAACCTTAAGGAGCAAGAAAGACAACTTAGAGAAACAATAAAAAAGTATCCCAAAGATTACCCTTCTGATGTTCCTTTGTAG 1461 0.4093 MAAQNLGRSKTLIQKNLLFLLGSVVNKSTFSPSTFQSGGVNPFVKCYHAPPHASLLGNNPDSLFCFSRFESTKAEARLNFQNYVSEDEDNNQGIDFPGGKVAFTSEMRFISDSDHKRVPCYRVLDDNGEIMKFSNYVQVNKEMAVKMYSNMVTLQTMDIIFYEVQRQGRITFYVTCAGEEAVNIASAAALAFDDIILPQYREPGVLLWRGFTLQQFADQCFGNTSDFGRGRQMPIHYGSNEHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTYCGDGSTSEGDFHAALNFAAVMEAPVIFICRNNGWAISTPVEEQFRSDGVVVKGQAYGIKSIRVDGNDALAVYSAVHTAREMAIREKRPVLIEALTYRVGHHSTSDDSTKYRPNDEIEYWKMARNPVNKFKRWVERNGWWSDKDEMEVRSSVRKQLLEAIKLAEKEQKPPLEDMFNDVYDQLPSNLKEQERQLRETIKKYPKDYPSDVPL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0743 486 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 118 481 IPR029061 -
Lan15g0743 486 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 1, MITOCHONDRIAL-LIKE 54 486 - -
Lan15g0743 486 CDD TPP_E1_PDC_ADC_BCADC 147 439 - -
Lan15g0743 486 Gene3D - 89 484 - -
Lan15g0743 486 Pfam Dehydrogenase E1 component 150 446 IPR001017 GO:0016624
Lan15g0743 486 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 54 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0743 Lan-Chr15 16461359 16469204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0743 48 324 Acyl Lipid Metabolism Gene Families AT5G09300 69.065 4.35e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0743 K00166 - gmx:100796766 763.066