Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0668 ATGGAAGTTTCTTCCTTTCTTCTTCCCAATCCTTCTCTCTCTTTCACTCCATTCAGGTCAAGTAAGGAGCTTTCACATATGTTGTCACTGCATGAGTTGAAAAGCATGAATTGTTTCTCACTTAGTAATCAAATCCAAAAGCACAATTACATTATACCAATTAGGACTATCTATAAATTTTCACTTGCTGGGACAGCTCCACGTAGTGATACTTATTCAGCTCCAAATCAATCTCCCAGAATGGGCAATTTTGAGAGAGAGTTGGAGGAATTATTTGATGAAGTCAAAAGATTGGTTAGGTTAGGAAACAAAAATGATGCTATTGACTTGCTTAATGCAAATTATGAAGTGGTGAAAGAGCGGTTGAATGGAACCAGTAAAGGCATTGAGGAAGCTGCAATTCTCGACGTTTTAGCTCTCGGTTATTTGGCTGTTGGGGACTTCAAGTTTGTTGATTCTCTCTTGGATTTGATGAAAGAAGTTGTTGACAATTTGGAGGATGATGTGCCACATCTGGATTCTATACTTATGCATATGGGAAGTATGTATGCGACATTGAGCAAATTCGAAAAATCATTGGAAACATACCAAAGGGCTGTCTACATTATGGAGAGGGCCTATGGCGAGGATAGCAATTTTCTTGTCACACCCTATCTGGCTATGGCAAAAACTCTTGGTTCTCTCGGAAACACAACAAAAGCAATAGAGAAATACCAGCGCGCAATCACTCTTCTAGAATCAGAGAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTGGTCTTGGCAATCTTTTACTGAAAGAAGCAAGAGTCAACGATGCAGAAACTCATTTTACTAGGGTGCTTAACATATATATGAAGTTATATGGACAAAATGATGGAAGAATTGGAATGCCCATGAGTTCTCTAGCCCGAGTGAAGTGTGCTCAAGGGAAGTCGGATGAAGCAATTAAATTATATAAACGTGCAATTAAGGTCATGACAGATTCCAAATACATGTCATTGGATGACAGTATCATGGAAAAGATGAGGGTAGATCTAGCTGATTTACTCCATAATGTTGGGAGAGGACAAGAAGGCAGAGAGCTATTGGAGGAGTGTTTATTGATCACTGAGAAGTTCAAAGGAAAGGAACACCCCAGCTTATTAACAAACATGATAAATCTTGCAACTTCATATTCACAATCAAAGAATTATGTGGAAGCCGAACGCTTGCTGAGAAGTGTTTTACAAATGATGATAAAGCAAAAGGGAACTGATGACCAATCCATCAGCTTTCCTATGTTGCACCTCGCAGTTACACTCTACCATTTGAAACAAGACGAAGAAGCAGAGAAACTCGCCCTCGAAGTTCTGCGCATCCGTGAGAAGGCGTTTGGACAAGATTCTCTCCCTGTTGGTGAGGCTTTGGACTGTTTGGTCTCTATTCAAACCAGACTCGGTAAGGACGACGGCGAGTTACTCGAGCAGCTTAAAAGGGTCCTGAGTATTCAAGAGAAAGAATTTGGACATGAGAGTGAGGAGGTTATGGTCACTCTTAAAAAAATTGTATTCTACTTAGATAAGGTAGGGAGAAAAGATGAAAAGTTCCCCATGCAGAGAAGATTATCTGTGCTTGGGAAAAAGTATAAGCAAATGATTCATCCATAA 1656 0.3986 MEVSSFLLPNPSLSFTPFRSSKELSHMLSLHELKSMNCFSLSNQIQKHNYIIPIRTIYKFSLAGTAPRSDTYSAPNQSPRMGNFERELEELFDEVKRLVRLGNKNDAIDLLNANYEVVKERLNGTSKGIEEAAILDVLALGYLAVGDFKFVDSLLDLMKEVVDNLEDDVPHLDSILMHMGSMYATLSKFEKSLETYQRAVYIMERAYGEDSNFLVTPYLAMAKTLGSLGNTTKAIEKYQRAITLLESERGAESKDLVVPLLGLGNLLLKEARVNDAETHFTRVLNIYMKLYGQNDGRIGMPMSSLARVKCAQGKSDEAIKLYKRAIKVMTDSKYMSLDDSIMEKMRVDLADLLHNVGRGQEGRELLEECLLITEKFKGKEHPSLLTNMINLATSYSQSKNYVEAERLLRSVLQMMIKQKGTDDQSISFPMLHLAVTLYHLKQDEEAEKLALEVLRIREKAFGQDSLPVGEALDCLVSIQTRLGKDDGELLEQLKRVLSIQEKEFGHESEEVMVTLKKIVFYLDKVGRKDEKFPMQRRLSVLGKKYKQMIHP* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0668 551 Pfam MalT-like TPR region 166 454 IPR041617 -
Lan15g0668 551 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Lan15g0668 551 SUPERFAMILY TPR-like 174 414 IPR011990 GO:0005515
Lan15g0668 551 Coils Coil 81 101 - -
Lan15g0668 551 Coils Coil 228 248 - -
Lan15g0668 551 Gene3D Tetratricopeptide repeat domain 120 344 IPR011990 GO:0005515
Lan15g0668 551 SUPERFAMILY TPR-like 347 483 IPR011990 GO:0005515
Lan15g0668 551 Gene3D Tetratricopeptide repeat domain 345 550 IPR011990 GO:0005515
Lan15g0668 551 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 83 537 - -
Lan15g0668 551 SMART tpr_5 173 206 IPR019734 GO:0005515
Lan15g0668 551 SMART tpr_5 215 248 IPR019734 GO:0005515
Lan15g0668 551 SMART tpr_5 427 460 IPR019734 GO:0005515
Lan15g0668 551 SMART tpr_5 257 290 IPR019734 GO:0005515
Lan15g0668 551 SMART tpr_5 299 332 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0668 - - aprc:113852595 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0668 15 15331110 15335273 Lan15g0668 15 15331110 15335273 ECH