Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0664 ATGGCCAACGTTTCAATTCCACTCCCACGACACGGTTTGTCTATACGCTATTCTTCAACCAAGCTCCCATGTTTCAAGACTTCACCTTCAATACTCAGAGTCTCTTCTTCTGTGTGTATTGTAGGAGTGAGTGAGTTAGATGAGTCTGGGAATAAGAGCGAGTTATTTAATTTCAATGGAATTAAGGGCGTGGCGTGTGGCATTCTTGCAGCTTGCGCTGTGAATTCTGCTGCATTCCCTGTTATTGCTGCTGGTCAGAGGCTGCCACCATTGTCAACTGATCCCAACCGCTGCGAGCGTGCATTTGTAGGCAACACAATTGGTCAAGCAAACGGTGTATATGACAAACCATTAGATCTCCGGCTTTGTGATTTCACTAATGAAAAAACCAACCTGAAGGGGAAGTCTTTGACTGCAGCACTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTAATGTCAAAGGCTTATGCTGTTGGTGGCAGCTTTAAAGGTGTGGACTTCTCAAATGCGGTGTTGGACCGTGTTAACTTCGGGAAAGCCGATCTTCAAGGAGCTATATTTAAGAACACGGTATTGTCAGGATCAACCTTTGATGATGCTAAGCTAGAAGGTGTAGATTTTGAGGACACTATCATAGGTTATGTTGATCTTCAGAAGTTATGCTTAAATAAGACCATAAATGATGAAACAAGAGCTGAACTAGGATGTAGATGA 729 0.4335 MANVSIPLPRHGLSIRYSSTKLPCFKTSPSILRVSSSVCIVGVSELDESGNKSELFNFNGIKGVACGILAACAVNSAAFPVIAAGQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDFTNEKTNLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVNFGKADLQGAIFKNTVLSGSTFDDAKLEGVDFEDTIIGYVDLQKLCLNKTINDETRAELGCR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0664 242 Gene3D - 116 242 - -
Lan15g0664 242 Pfam Pentapeptide repeats (8 copies) 177 214 IPR001646 -
Lan15g0664 242 Pfam Pentapeptide repeats (8 copies) 129 158 IPR001646 -
Lan15g0664 242 SUPERFAMILY Pentapeptide repeat-like 121 229 - -
Lan15g0664 242 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 242 - -
Lan15g0664 242 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 242 IPR044195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0664 Lan-Chr15 15294522 15297663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0664 - - gmx:100785667 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0664 15 15294522 15297663 Lan15g0664 15 15294522 15297663 ECH
Lan15g0664 15 15294522 15297663 Lan3g0798 3 14883690 14885582 LSH