Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0659 ATGTCTGAGGGTTATTGGAGATACGGGGAACCACGCCACGCTCCTTCTTCCGTCGCCGGAAAACGCTCCCGGAACGATTACGATGTATCTGGCGTTCATGACTTGGCTAGTTACTATCCCCATGATCATGATAGAGGAGCAATCCAAGCAATTAGAGATACTGAAACTCTTGAAGCATCCTATGAGCGCTACCTCCGTAGTGCGCAAGTTTCATCTTATGGTGCTGGACAGCCTACTAGAACCATTGATGGGAGAACTTCCAGTCATTCTGTTGACGATTCACATTTCCCAAGTATTGGTGGGGGAGTAAACCCAGGAAAAGACAAGATCATGGGATTAGGTAGTGGAAGGGCTGACCATTCTCTTCCACATGATGCTACCAATACGCTTTTCGTGGAGGGTTTACCTCCCGGTTGTACAAGACGGGAAGTAGCTCATATCTTTCGTCCTTTCGTTGGCTACAAAGAAGTCAGACTTGTTAGCAAGGGATCAAGACAACCTGGGGGTGATCCACTGGTACTTTGTTTTGTCGATTTTGTGAGCCCAGCACATGCAGCAACTGCCATGGATGCATTGCAGGGTTACAAATTTGATGAGCTTGACCGCAACTCGGCAAATTTAAGGTTCCAATTTGCTCGCTATCCTGGTTCAAAGTCAGGTGCTGTGCATCGTGGCAACCATTGA 684 0.4766 MSEGYWRYGEPRHAPSSVAGKRSRNDYDVSGVHDLASYYPHDHDRGAIQAIRDTETLEASYERYLRSAQVSSYGAGQPTRTIDGRTSSHSVDDSHFPSIGGGVNPGKDKIMGLGSGRADHSLPHDATNTLFVEGLPPGCTRREVAHIFRPFVGYKEVRLVSKGSRQPGGDPLVLCFVDFVSPAHAATAMDALQGYKFDELDRNSANLRFQFARYPGSKSGAVHRGNH* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0659 227 MobiDBLite consensus disorder prediction 1 24 - -
Lan15g0659 227 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 130 198 IPR000504 GO:0003723
Lan15g0659 227 MobiDBLite consensus disorder prediction 72 103 - -
Lan15g0659 227 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 14 226 - -
Lan15g0659 227 SMART rrm1_1 129 203 IPR000504 GO:0003723
Lan15g0659 227 Gene3D - 124 219 IPR012677 -
Lan15g0659 227 PANTHER PROTEIN MATERNALLY EXPRESSED GENE 5 14 226 - -
Lan15g0659 227 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 128 214 IPR000504 GO:0003723
Lan15g0659 227 CDD RRM_RBPMS_like 128 208 - -
Lan15g0659 227 SUPERFAMILY RNA-binding domain, RBD 81 198 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0659 Lan-Chr15 15173967 15179196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0659 - - gmx:100800440 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0659 15 15173967 15179196 Lan15g0659 15 15173967 15179196 ECH