Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0654 ATGGGTGGTTCATCAGACACGAGGTTACTGCACGAGCTGCTATTGTACGCAGCAAGTGCAGCTCTGAGTTGCTTGGTGTTGTTCACGGGGCTCCGACAACTTGACCCGAACCGCGAGGCATCGAAGAAGGCTTTAGAGCATAAGAAAGAGATTGCTAAGCGTCTTGGTCGACCACTTATTCAAACAAACCCTTATGAGGATGTCATAGCCTGTGATGTGATAAATCCCGACGATATTGATGTAGAGTTTAATTCTATTGGGGGACTGGAAAAAATCAAGCAAGCTTTGTTTGAGCTTGTTATTCTGCCGCTAAAAAGACCTGACTTGTTTTCTCATGGTAAGCTTCTTGGACCACAAAGGGGGGTTCTGTTGTATGGACCGCCTGGAACAGGAAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCAGAAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCTCAAAAGCTTGTGGCTGCCGTATTTAGCCTGGCTCATAAGCTCCAGCCTGCTATCATATTCATTGATGAAGTTGACAGCTTTTTGGGTCAACGTCGTACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCTTTGTGGGATGGGTTTACCACAGATCAGAATGCGCGAGTTATGGTCCTTGCAGCGACTAATCGCCCTTCAGAACTTGATGAGGCAATACTTCGGCGTCTTCCTCAAGCCTTTGAGATTGGAGTTCCAGACCAGAGAGAGAGGGCTGAAATATTGAAGGTTATCTTAAAGGGTGAGAGGGTCGAAGACAACATTGACTTTGGTCATGTAGCTGGTTTATGTGAGGGTTACACTGGTTCAGATCTATTCGATCTCTGCAAGAAGGCTGCCTATTTTCCTATCAGAGAACTTCTGGATGAAGAGAAGAAAGGGAAACGATCTTCTGTGCCCAGGTTTTTGTCTCAGTTAGATTTCGAGAAGGCCCTTGCCACTTCACAGAAGACAAATGTTGCTGCAAGTGAATATGGAGGAATAAGCCTACAATCACCATCAAGATTCACAGTGCACAGTGAGACAGAGTAA 1092 0.4478 MGGSSDTRLLHELLLYAASAALSCLVLFTGLRQLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDDIDVEFNSIGGLEKIKQALFELVILPLKRPDLFSHGKLLGPQRGVLLYGPPGTGKTMLAKAIAKESEAVFINVRISNLMSKWFGDAQKLVAAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPDQRERAEILKVILKGERVEDNIDFGHVAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRSSVPRFLSQLDFEKALATSQKTNVAASEYGGISLQSPSRFTVHSETE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0654 363 CDD AAA 87 251 - -
Lan15g0654 363 Gene3D - 80 338 IPR027417 -
Lan15g0654 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Lan15g0654 363 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Lan15g0654 363 SMART AAA_5 118 254 IPR003593 -
Lan15g0654 363 Pfam AAA+ lid domain 274 310 IPR041569 -
Lan15g0654 363 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Lan15g0654 363 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 342 - -
Lan15g0654 363 Gene3D - 253 333 - -
Lan15g0654 363 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0654 Lan-Chr15 15094969 15099760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0654 81 316 Calmodulin-binding Proteins AT3G56690 34.298 4.25e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0654 K22530 - gmx:100788677 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0654 15 15094969 15099760 Lan15g0654 15 15094969 15099760 ECH