Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0650 ATGTTCAACTCTACTCAGTTGAACAACAACAACGACGACACTCCCTTCCTCTCCGGCGGTGGCGGCGTCCGCGCCACCTTCTCTTCCTTGATGGCCGCCACAGCCATCCGATCCTCTTCGGTGGTTATTTTCTCTGCAGTCGCTGGAATCGCCGTCGTCTTCTTCTACGGTGCCAATAGGGGCCGTCTTAAGTCACCATGGTCACGCAGGAGAAGAAAACGTGTCCTTTCATGTCATCGATGGAAAAGCTTATTCACACAAGATGGGAGATTCCATGACGGTGGGATTAAGTTTCTGAAACGAGTTCGCAGTGGAGGTGTTGATCCTAGTATTAGGGCTGAAGTTTGGCCATTCCTACTTGGAGTCTATAACTTGGACAGTACCAAAGCAGAGCGAGATGTAATAAAAAATCAAAATAGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGACAACTGCTAAAGCAGAGCAATGGAAGCTTCAAGTTAAATGAAAGTGGTGAAATCAGCTATGAAGGAGATGGTGCAAGTCTTGTTCAAGATTCTGGTTCTCCTAATTCTGAAGACGCAACAAGTGCCAGGGAATCCCTTTCTAGTGAGGAAAGGAGCCCAGATACTGAATATTCGGATGATCCATCTAGTGCCTTGTTGGAAGGATATGATGTTCTGAATATTAGCAATGCTGATATATCTGCACTGGATACTGATTCCTCTGATTCAGACTCCTCAGAAGGTCTTGAAGTGATTCAGGCATTACCTTCTGATGGTGTTCGAGGAGAGAACAATTCCAAGAGAATTTCCAAGGTAAATTCGTCTCTCTCCCCAAGGAAAGCCACATCGAAACTACGAACTAATGAAGATTTTCCCACATGGCAACGAATCATCAGACTTGATGCATTACGTGCCAATGCAGAATGGTTGCCATACTCCCCCTCCCAAGCTACTGTAACGGATAGTAGGGCACATCGTTCTGCGGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAGGCCAGCAGAATCTTTCATGCTGCTCGACTAGTTGCTATTCTTGAAGCATATGCACTGTACGACCCTGAAATTGGCTACTGTCAGGGTATGAGTGATCTGCTATCTCCCATAGTTAGTGTTATACCAGAAGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCAAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGGAGGCAACTTGATATAGTTGCAAAAATAATCAAGTTTAAGGATGCACACTTGTTTAGACATTTGGAGAAGCTTCAGGCCGATGATTGCTTTTTCGTGTATAGAATGGTAGTGGTATTGTTTAGAAGGGAGTTGACATTTGAACAAACTCTTTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGGGCAGGCATTGGGAAATCTGCATGGAGCAGAATTAGGCAGCGTCCTCCGCCAACAGAAGATTTATTGCTTTATGCCATAGCAGCTTCAGTGTTACAGCGGAGGAAGTTAATTATTGAGAAATATAGCAGCATGGATGAGATCATCAAGGAATGCAATGGCATGGCAGGACAGCTTGATATTTGGAAGTTGCTGGATGATGCACATAACTTGGTATCGACCCTTAATGACAAAATGAAATTGAGACGTAATTCCGATGAATGA 1674 0.4462 MFNSTQLNNNNDDTPFLSGGGGVRATFSSLMAATAIRSSSVVIFSAVAGIAVVFFYGANRGRLKSPWSRRRRKRVLSCHRWKSLFTQDGRFHDGGIKFLKRVRSGGVDPSIRAEVWPFLLGVYNLDSTKAERDVIKNQNRKEYEKLRRQCRQLLKQSNGSFKLNESGEISYEGDGASLVQDSGSPNSEDATSARESLSSEERSPDTEYSDDPSSALLEGYDVLNISNADISALDTDSSDSDSSEGLEVIQALPSDGVRGENNSKRISKVNSSLSPRKATSKLRTNEDFPTWQRIIRLDALRANAEWLPYSPSQATVTDSRAHRSAEAVGLKDYGHLEASRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIVSVIPEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDAHLFRHLEKLQADDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRPPPTEDLLLYAIAASVLQRRKLIIEKYSSMDEIIKECNGMAGQLDIWKLLDDAHNLVSTLNDKMKLRRNSDE* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0650 557 MobiDBLite consensus disorder prediction 173 214 - -
Lan15g0650 557 MobiDBLite consensus disorder prediction 194 208 - -
Lan15g0650 557 ProSiteProfiles TBC/rab GAP domain profile. 106 467 IPR000195 -
Lan15g0650 557 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 18 549 - -
Lan15g0650 557 SMART tbc_4 103 512 IPR000195 -
Lan15g0650 557 PANTHER GTPASE ACTIVATOR PROTEIN OF RAB-LIKE SMALL GTPASES-LIKE PROTEIN 18 549 - -
Lan15g0650 557 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 404 541 IPR035969 -
Lan15g0650 557 Gene3D - 403 551 - -
Lan15g0650 557 MobiDBLite consensus disorder prediction 263 282 - -
Lan15g0650 557 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 84 427 IPR035969 -
Lan15g0650 557 MobiDBLite consensus disorder prediction 233 282 - -
Lan15g0650 557 Coils Coil 136 156 - -
Lan15g0650 557 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 268 399 - -
Lan15g0650 557 MobiDBLite consensus disorder prediction 177 193 - -
Lan15g0650 557 Pfam Rab-GTPase-TBC domain 346 466 IPR000195 -
Lan15g0650 557 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0650 Lan-Chr15 15024703 15029847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0650 - - gmx:100793557 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0650 15 15024703 15029847 Lan15g0650 15 15024703 15029847 ECH