Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0598 ATGGCTACTCTCTTCAACTTCCAAACTTCTCATCTTCCTTCTCCATCACTATCATTCTCATCATACCCTTCTTCTACACTCTCTCTTCTTTCTCCACCTCACTTCTCAACAACAAAGCTCACAACTTCCTTCACCCAAACCCTGAAAATCGCTTCTACCAATGCAATCTCACCCACCACCAACCGTAGCGGTGGTTCAATCTCACCCGTTCGTATGTCATGGGATGGGCCACTCTCTTCCGTCAAATTAATCACACAGGGCAAAAACCTAGAGCTAAGTGATGTGGTGAAGCAGCATGTGGAGGAGAAGGTAGGGAAAGCGGTTCAGAAGCATAGCCATTTAGTTAGAGAGGTTGATGTGAGGCTATCTCTTAGAGGAGGAGGAGAATTTGGACGAGGACCCTTGACTCGTAGATGTGAGGTAACTCTGTTCACAAAAAGGCATGGAGTGATCCGGGCTGAGGAGGATGCAGAAACAATCTATGGAAGCATAGATTTGGTGTCCTCGATCATTCAAAGGAAGTTGAGGAAGATAAAGGAAAAGGAGTCAGACCATGGTAGACACATGAAGGGATTCAATAGATCGAAGGTTAGGGAAGTAGTAGAACCGGTGCCCGTGGACGACGATGAGATATCTCCACAAGAGGAGGAAGAATCAATTGAGGTTGTCCGGACAAAATTCTTCGACATGCCACCATTGACTGTATCTGAAGCTATTGACCAGCTCGAAAATGTTAATCACGATTTCTATGCTTTTCGAAATGAAGAAACTGGGGAGATAAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGACTCATTATACCCAAAGGAGATGGTCAAGCAGAGAAATTGGAGCCCATAGCTAGAGAACCCTCCCTGAAAGAATGA 891 0.4456 MATLFNFQTSHLPSPSLSFSSYPSSTLSLLSPPHFSTTKLTTSFTQTLKIASTNAISPTTNRSGGSISPVRMSWDGPLSSVKLITQGKNLELSDVVKQHVEEKVGKAVQKHSHLVREVDVRLSLRGGGEFGRGPLTRRCEVTLFTKRHGVIRAEEDAETIYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRSKVREVVEPVPVDDDEISPQEEEESIEVVRTKFFDMPPLTVSEAIDQLENVNHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGDGQAEKLEPIAREPSLKE* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0598 296 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 84 181 IPR003489 GO:0044238
Lan15g0598 296 Gene3D - 232 282 IPR038416 -
Lan15g0598 296 TIGRFAM yfiA: ribosomal subunit interface protein 83 186 IPR003489 GO:0044238
Lan15g0598 296 Hamap Ribosome hibernation promoting factor [hpf]. 81 277 IPR034694 -
Lan15g0598 296 PANTHER 30S RIBOSOMAL PROTEIN 66 280 - -
Lan15g0598 296 CDD RaiA 82 181 IPR003489 GO:0044238
Lan15g0598 296 Gene3D - 82 186 IPR036567 -
Lan15g0598 296 PANTHER 30S RIBOSOMAL PROTEIN 66 280 - -
Lan15g0598 296 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 83 188 IPR036567 -
Lan15g0598 296 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 218 273 IPR032528 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0598 - - gmx:100803327 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0598 15 13478308 13481159 Lan15g0598 15 13478308 13481159 ECH