Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0574 ATGAATATGGAATGGTCGACTTGCCCCTTCTGTGATTTATCACTTCCCTCATCCCAACTTCAGTGGCACGCCAATGCTCACTTTGATGACCGCGAAGATCTGCCCCAACAATTTCATCTTACCTCAACTCCATCCCCTCAATCTCTTCAGAGTGAACAAGCAGCCAGTGACTCGCAGTTCGGAGAAACATCGGGAGATTGTAATCATTGGGATGTTGGTGAGACCAGCAGAGATAATGGGGAATTCACAATGGATGACAAGATGTCTTCCTTGATTGGTTTACAGGCATGGAGCAAATTTTATAAAGTTGAAGGGGGCTTGATGGCCTTGTTGAGAAACTGTTTGGAATCCGAACCTGAAAACTCAAAGGCCATTTTGTCAGGTTATGTTGATCATTTCCAGAGCCTTGAGTTCGAGGATGCGGGATGGGGTTGTGGTTGGCGTAACATTCAAATGCTTTGCTCTCACTTGCTAGTACAAAGACCAGAAGCAAGAGAAGCTTTGTTTGGTGGTTCAGGATTTGTTCCTGATATCCCTTCACTCCAGAGATGGCTTGAGATTGCTTGGGAAAAGGGTTTTGATCCAGATGGATCTGCTCAATTTGATAATGCTATTTATGGTTCTCAAAAATGGATAGGAACTACTGAGTGTGCTACTCTTTTGCGTTCCTTTGCTCTTCGGGCTAGAGTCGTGGATTTTGGTCCTAAGGAATCCGAATCGTGCTATATATCTGTCCCAGGTTCAAGTGTTGATGATGCTTTGGATAAAAAAAGTAAGGCCTATCAAGTTCTAACGGATTTTGTGTGGAATTACTTCTCTGATAAAAGCTCAATTCAATTTGATCATCAGCGTGTTTTGATCAGTGAGAAAACGCCCTTGTACTTTCAACATGATGGTCATTCAAGAACAATAGTTGGAATACAAGTCGAACATCAACTGAATGGAATTCTGGAATATAATCTCCTAATTTTGGATCCCGCTCATAGTACGGTTGCCCTTGAAAGATCACTGAAGGAGAAAGTTGGCTGGCAGAAACTCATGAAAAGAGGAATGCATACTCTGGAGGAGCCACAATATCAGTTGTGTTATGTTGATCCTGGAATTGCCAGTGGTGAGGAGATGGAAAAACTCAAGACAATTGATAGTGTCTTCCTTGAATTTTAG 1164 0.4244 MNMEWSTCPFCDLSLPSSQLQWHANAHFDDREDLPQQFHLTSTPSPQSLQSEQAASDSQFGETSGDCNHWDVGETSRDNGEFTMDDKMSSLIGLQAWSKFYKVEGGLMALLRNCLESEPENSKAILSGYVDHFQSLEFEDAGWGCGWRNIQMLCSHLLVQRPEAREALFGGSGFVPDIPSLQRWLEIAWEKGFDPDGSAQFDNAIYGSQKWIGTTECATLLRSFALRARVVDFGPKESESCYISVPGSSVDDALDKKSKAYQVLTDFVWNYFSDKSSIQFDHQRVLISEKTPLYFQHDGHSRTIVGIQVEHQLNGILEYNLLILDPAHSTVALERSLKEKVGWQKLMKRGMHTLEEPQYQLCYVDPGIASGEEMEKLKTIDSVFLEF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0574 387 MobiDBLite consensus disorder prediction 37 79 - -
Lan15g0574 387 Gene3D - 110 367 - -
Lan15g0574 387 MobiDBLite consensus disorder prediction 37 65 - -
Lan15g0574 387 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 5 387 - -
Lan15g0574 387 Pfam Peptidase family C78 122 362 IPR012462 -
Lan15g0574 387 PANTHER ZINC FINGER PROTEIN 5 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0574 Lan-Chr15 13110205 13114836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0574 K24134 - gmx:100781936 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0574 15 13110205 13114836 Lan15g0574 15 13110205 13114836 ECH
Lan11g0420 11 3062729 3065477 Lan15g0574 15 13110205 13114836 PCT
Lan15g0574 15 13110205 13114836 Lan11g0420 11 3062729 3065477 PCT