Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0532 ATGAGAGGAACAATGGGTACTTCTCCTCATGCAGTTGAAGCTCGACACCGTTTACCAGCATCTATTGAAGATTTATACAAACGAAGACTCTCAAGAAGTAAAGGAAAAGATGTAGAGAAGCCTTTCCACTTATCTACTACCCAAGATAGGAACTCAACAAGATGCAAGTTTTCTTTCTTAAAACTTATCTTACTGATAACCATTTGTGGCACTTTCATTTTGCTCCTGTACTCTCCAGTGGTTTACAATACCAATCACTTATCAAGTTCTGGCTCTCGGTGGATATGGGGTAGCGAAGATCCTCGGTACACGTCGAATGTAGATACCGACTGGAACGACATAATGAAAATTACTAAGAAGCTTACAGGGAAAAATGATTTTCAAGGGATTGGCCTTCTAAATTTCAACAAGACAGAACTAGTTCATTGGGAGAATGTTATTCCTGATGCAACACATGTTGTTCTTCACATGGACTATGCTGCAAAGAATGTAACATGGGAATCATTGTATCCTGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCTGTTTGCCCTTCTCTGCCGAGTCTTGGATCTCCCGGTATAAGACTTAATCTCATTGCTGTCAAGCTTCCTTGTCACGATACAAGGAATTGGTCTAGAGATGTCGGTCGTTTGCACCTTCAGCTTGCAGCTGCTGGACTCGCAACCTCTTTCAAAGGCAATTATCCGGTATATGTGCTCTTCATTACCAATTGTTTTCCCATACCAAATCTTTTTACTTGCAAAGAGTTAGTTGGACATGAAGGGAATGTATGGTTATACAAACCAAACTTGAGTGTTTTGAGAGAAAAGGTTCAGCTCCCAGTAGGATCTTGTGAACTTGCACTTCCTATGAGAGGCCAAGAGCTGGTTTACAATGGAAATGTTCCTAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGATTATGTTTGTGGAGCTATAGCTGCTGCACAAAGCATCCGCATGTCCGGATCGACTCGAGACCTTGTAATACTTGTTGATCAGACAATCAGTGGATACCACAGAAGTGGTTTGGAAGCAGCAGGTTGGAAAGTTCGAACAATACAAAGAATCAGAAATCCCAAAGCTGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGTTATGGCAGCTGACAGATTATGACAAAATAATCTTCATTGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTCTTCGGAATGCCGCAAATCACTGCTACTGGAAATGATGCTACACTTTTTAACTCAGGTGTCATGGTGGTAGAGCCATCAAATTGCACATTCCAGCTCCTAATGGAACATATCAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGGTACTTGAATGAAATATTTACATTGTGGCATAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGGTTGGTGATGAGGAAGAGAAGAAACAAATGAAGACTATGTTATTCGGCGCGGAGCCTCCAATTCTCTATGTCCTTCACTACCTTGGCATGAAGCCATGGTTATGCTTCCGGGACTATGATTGTAACTGGAATTCTGATTTATTTCATGAGTTTGCAAGTGATGTTGCACATGAAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAAAAGTTTTGCATGTTGAAGTCTAAGCAGAAGGCACAGTTAGAGTGGGATCGAAGGCAGGCCGAGATAGCAAACTACACAGATGGGCATTGGAGAATTAAAGTTAAGGATAAGCGCTTGAAGAAATGTATAGATAACTTGTGTAACTGGAAAAGCATGTTGAAGCATTGGGGAGAAACAAATTGGACAGATGATGAGTCTTATACTCCAACACCACCTGCCATTACCACGTCACATCTTTCTAGTTTGTGA 1920 0.4115 MRGTMGTSPHAVEARHRLPASIEDLYKRRLSRSKGKDVEKPFHLSTTQDRNSTRCKFSFLKLILLITICGTFILLLYSPVVYNTNHLSSSGSRWIWGSEDPRYTSNVDTDWNDIMKITKKLTGKNDFQGIGLLNFNKTELVHWENVIPDATHVVLHMDYAAKNVTWESLYPEWIDEEEETEVPVCPSLPSLGSPGIRLNLIAVKLPCHDTRNWSRDVGRLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFTCKELVGHEGNVWLYKPNLSVLREKVQLPVGSCELALPMRGQELVYNGNVPREAYATILHSAHDYVCGAIAAAQSIRMSGSTRDLVILVDQTISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPQITATGNDATLFNSGVMVVEPSNCTFQLLMEHINEIESYNGGDQGYLNEIFTLWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGAEPPILYVLHYLGMKPWLCFRDYDCNWNSDLFHEFASDVAHEKWWKVHDAMPELLQKFCMLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDKRLKKCIDNLCNWKSMLKHWGETNWTDDESYTPTPPAITTSHLSSL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0532 639 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 616 - -
Lan15g0532 639 Pfam Glycosyl transferase family 8 312 519 IPR002495 GO:0016757
Lan15g0532 639 SUPERFAMILY Nucleotide-diphospho-sugar transferases 307 552 IPR029044 -
Lan15g0532 639 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 554 IPR029044 -
Lan15g0532 639 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 616 - -
Lan15g0532 639 CDD GT8_Glycogenin 307 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0532 Lan-Chr15 12361191 12367310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0532 13 639 Glycosyltransferase AT3G18660 67.445 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0532 K20890 - gmx:100809361 1195.26